Algoriphagus halophytocola: OM944_16090
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Entry
OM944_16090 CDS
T10580
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ahao Algoriphagus halophytocola
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahao03400
]
OM944_16090
DNA repair and recombination proteins [BR:
ahao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OM944_16090
Archaeal homologous recombinant proteins
OM944_16090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
Metalloenzyme
Motif
Other DBs
NCBI-ProteinID:
UZD22181
UniProt:
A0ABY6MIS5
LinkDB
All DBs
Position
complement(3899002..3902031)
Genome browser
AA seq
1009 aa
AA seq
DB search
MIPIRLDIQGLYSYKEKQTIEFDKLTAAGLFGIFGAVGSGKSSILEAILLALYGSTERLS
DRGEKNSMVNLQSDLLLLNFEFSSGRNNAKTYLARYSAKRNSKNFDDIKPAERSFYEKVD
GNWEPISSSAEEIIGMKKEHFKQTVIIPQGKFREFIDQKPLDQAKMMKELFGLERFDLQD
KTRTLLKTVKEQKIRLETQSQGLEEFSEQLLTEKQSQFKELKKQATEASQKLKTAEAKLR
LQEDLRSKNLQLLKFRKERESLNLQRPEIEKQRQLHSEFIKAKTHLRPVWEQIRDTKAEL
EKYKVSVIDCERFKIELAKVVADLEKEEVELKKKNQERPHREAKIRDLKKVIEIQNLETQ
RVVANDKLQDLQPTIERRKQTQKTLEAKIAELETEAEKISSTDSSFLANLLSWAKDWKNL
ENQLDKLQAEETEITTEVERINQKLETLQSTIPANLGSLENWESTQKSAIQELEKQRDGV
IQKQGLAAHVHLLHQGEPCPLCGAMDHPNPLEGDGAVDLGEITQQIKSAKLLLEQIQTSK
STQSELRFHLENHQKNSAAKKKDLQQLRENLSSIKTTLAKEGIGSHAELLTKIQAIEHSS
QSREKLIQEVKTLRKNWDAERVSIEKSEKELQQAQLKLQSVLSSISAKKEEIRDMAFCKQ
FFTKESSQIQAAIDKVEKDIEEALQSLEGKQKHLREKRSVSDKNLADLANFTQLRDQRTE
KLELLSLKYNELKVQHGFLDEERLIQLFQHSIDAEKVAKDIADFDRKYDIAENRIQELEA
EAGVADFLEQAFQELFSSFENLKINAETCQNQVLLLDQEIQEAISKLAEKKNIQANFAKL
ETRESYLKELDNLFRGSGFVKFVSSIYLKELCNTANVRFMKLCKNRLSLEIDDNNTFWVI
DYLNGGKKRLLKTLSGGQTFQASLCLALALAEKVKALNQADQSFFFMDEGFGALDKNALR
VVFETLKSLRHENRIVGIISHVEDLQQEIGVFANVELDPELGSQVSYSF
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgattcctattagacttgacattcagggattgtattcctacaaggagaagcagacgata
gaatttgataagcttacagcagccggattgtttggaatttttggtgcggtgggcagcgga
aaatcctcgattttggaagcgattcttctggcactctatggaagcaccgagcggctttcc
gaccggggagaaaagaacagcatggtcaatttgcagagtgatttactgcttttgaatttt
gagtttagctcaggacgaaataatgctaaaacctacttggctcgctattcagcgaaaaga
aactcaaagaattttgatgatatcaagcccgcggagcgctcattttatgaaaaggtagat
ggaaattgggaaccaattagttctagtgctgaggaaattatcggcatgaaaaaagagcat
ttcaagcagactgtgatcattccgcaggggaaattccgagaatttatcgatcaaaaaccg
ctggaccaggctaagatgatgaaggagctttttggattggagcgatttgatcttcaagac
aaaactagaactcttctcaaaacagtaaaagagcaaaaaatccgtctggaaacgcaatcg
cagggtttggaagagttttctgagcaactgttgactgaaaagcaaagtcagtttaaggaa
ttgaaaaagcaggccacagaagcttcgcaaaagctaaaaaccgcagaagctaaactcaga
cttcaagaagacctacgaagtaaaaatcttcaattgctcaagtttaggaaagaacgagaa
agcctgaatttacagcgccccgaaatcgaaaaacagcggcagcttcactccgaatttatc
aaagctaaaacccatcttcgcccagtttgggaacagattcgggacacaaaagccgagctg
gaaaagtacaaagtaagcgtaattgactgtgagcgcttcaaaattgagctggccaaagta
gtagctgacctagaaaaagaagaagtagagctcaaaaagaaaaatcaggagcgcccacat
cgcgaagcgaaaatccgtgatttgaaaaaagtcatagaaatccaaaacctggaaactcag
cgagtagtggccaatgataagctgcaggatttacagccaaccatagaaagaagaaaacag
actcaaaagacactagaagcaaaaatcgctgagctagaaacagaggcagaaaagattagt
tctacggatagctccttcctagctaatttactcagttgggctaaagactggaaaaacctg
gaaaatcaattggataaacttcaagctgaagagaccgaaataacaacagaagttgagcga
atcaaccaaaaacttgagaccttacaaagcactattcctgctaatctgggctccctggag
aactgggaatctactcagaaatccgccattcaggaactggagaaacaacgggatggggtg
atacaaaaacaaggccttgccgcccatgttcacttactgcatcagggcgaaccttgtcca
ctttgcggagccatggaccatccaaatccgcttgaaggtgatggagctgtagatttaggg
gaaataacccagcaaataaagagtgctaagctacttcttgagcagatacaaacttccaaa
tccacacaaagtgaattgcgctttcatctcgaaaatcatcaaaaaaacagcgctgcgaaa
aagaaggacttacagcaattgcgtgaaaacctcagttccatcaaaaccactcttgccaaa
gaaggaattggttcacatgctgaattattgacgaaaatccaggccatagaacacagttcc
caaagccgggaaaaactcatccaagaagtgaaaacgcttcgcaaaaactgggatgctgag
cgggtttcgattgagaaatcagaaaaagaactgcaacaggcccagctcaaacttcaatca
gtgctttccagtatttccgcaaaaaaagaggaaatccgtgatatggctttctgcaagcag
ttttttaccaaagaatcctcgcagatacaagccgccattgacaaggtggaaaaagacatt
gaggaggcgcttcaatcgctcgaaggaaaacaaaaacatcttcgtgaaaaacgcagcgta
tcggacaagaacttggcagatctggccaatttcacacagctacgagaccagcgtacggaa
aagctagagctgctttctttaaaatacaatgagttaaaagttcagcatggattcttggat
gaggagcgactgatccagcttttccaacattccatagatgccgaaaaggtagcaaaagac
attgccgactttgaccgaaagtatgacattgctgaaaatagaattcaggaattggaagcc
gaagcaggagtagcggattttctggagcaagcttttcaagagctcttttcttccttcgaa
aatttgaaaatcaatgcggagacctgccaaaaccaggtactattgcttgaccaagagatc
caggaagccatctctaaactagccgagaagaaaaatattcaggcaaatttcgccaagctg
gaaacccgggaaagttacctcaaggagctggacaacctgttccgaggcagtggcttcgtg
aagtttgtaagttcgatttacctgaaagagctttgtaatacagcgaatgttcgctttatg
aagctctgcaaaaatcgcctaagcttggaaattgacgacaacaataccttctgggttatt
gactacttgaacggcggaaaaaagcgcttgcttaaaacgctttccggaggtcagactttc
caagcttccctgtgtttagcattggctttggcagagaaagtaaaagctctcaaccaagca
gatcaaagctttttcttcatggatgaaggtttcggagcattggataaaaatgcactacgg
gtggtttttgaaacgctcaaatcacttcgccacgaaaaccggatcgttggtatcatcagc
cacgtggaagatcttcagcaggagatcggtgtctttgcaaatgtagaactcgatcctgag
ctaggttctcaggtaagttattccttctag
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