Algoriphagus halophytocola: OM944_16095
Help
Entry
OM944_16095 CDS
T10580
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ahao Algoriphagus halophytocola
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahao03400
]
OM944_16095 (sbcD)
DNA repair and recombination proteins [BR:
ahao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OM944_16095 (sbcD)
Archaeal homologous recombinant proteins
OM944_16095 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UZD22182
UniProt:
A0ABY6MEF4
LinkDB
All DBs
Position
complement(3902028..3903257)
Genome browser
AA seq
409 aa
AA seq
DB search
MIKILHTADWHLGKRLQEYSRLEEQKLVLEEIQQIADREEVDLILLAGDIFDTFNPNHEA
VELLYKSLRRLSKGGKRPIIAISGNHDSTQFVEAPDPLAREMGIFFYGKYDTVIPTGKLD
NGIEITQSATGFVEMKLPQIDFPVRIILAPYANEVSMKTYLGEGDREEEFRNLMGAKWNE
IAEQYCDEKGVNLFAGHFFFMKEGEKPEAEPESERPILHVGGTQALFTRNIPYQIQYAAL
GHLHRYHAVGHEHCPVVYSSSPLAYSFSEADQQKQVVIIEAEPEKPVTFTPVGLKEGRPL
YRKTFDKLTDTLAWLEENPYCFVELTYITESSIEAATRKAIMKAHDGIVNLIPQIKNPLG
RENTSLQVEDLGKDMESLFKLFYESDKGQEPNEELLTIFKEVISQNNEA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaatcctccacacagccgattggcacctgggcaaaagattgcaagaatactcc
agactagaagagcaaaagctggttttagaagaaatccagcagatcgcagatagagaagaa
gtggatctgatcctattagcgggtgatattttcgataccttcaatcccaatcacgaagct
gtagaattgctttacaaatcactccgcaggctctccaaaggcggcaaacggccgattatc
gccatctccggaaatcatgacagtacgcaatttgtcgaagccccggatccactggcccgc
gaaatgggcatattcttttatggaaaatacgacaccgtcatcccaactggaaagttggat
aatggtatagagatcacacagtctgcaacaggttttgtagagatgaaactgccccaaatt
gactttccagttcgaatcattttagctccttatgccaatgaggtttcgatgaaaacttac
ttgggcgaaggagatcgtgaggaggaattccgcaatttgatgggtgcaaagtggaacgag
attgcagagcaatactgcgatgaaaaaggagtaaatctctttgccggacactttttcttt
atgaaagaaggagaaaaaccggaagccgaaccagaatctgagcgaccgattcttcatgtt
ggcggaacacaggctcttttcaccagaaatatcccttatcaaatccaatatgcagcttta
ggtcatttacatcgctaccatgcggtagggcacgagcattgtccagtggtatattccagt
tcgcctctcgcttactcttttagcgaagcagaccagcaaaagcaagtggtgatcatcgaa
gccgaaccagaaaaacctgtcacctttacgccagtcgggttaaaagaaggaagaccactt
taccgcaaaaccttcgataaactaacagataccctggcatggcttgaagaaaatccctac
tgctttgtagagttgacttacatcacggaaagttccatagaagcggccacccgaaaagca
atcatgaaagcccacgacggaatcgtgaacctgatccctcagatcaaaaatcctttgggc
cgggaaaacaccagtttgcaagtagaagacctaggaaaagatatggaaagcctcttcaaa
cttttctatgaaagcgacaaaggccaggagccaaacgaagaattgctcacaattttcaaa
gaagtcatcagccaaaacaacgaagcatga
DBGET
integrated database retrieval system