Algoriphagus halophytocola: OM944_17245
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Entry
OM944_17245 CDS
T10580
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ahao Algoriphagus halophytocola
Pathway
ahao02024
Quorum sensing
ahao03060
Protein export
ahao03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OM944_17245 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OM944_17245 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OM944_17245 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ahao02044
]
OM944_17245 (ffh)
Enzymes [BR:
ahao01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
OM944_17245 (ffh)
Secretion system [BR:
ahao02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OM944_17245 (ffh)
Eukaryotic Sec-SRP protein
OM944_17245 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_16
AAA_22
Zeta_toxin
APS_kinase
ATP_bind_1
nSTAND3
ParA
cobW
MeaB
KAP_NTPase
AAA_30
ArsA_ATPase
KTI12
AAA_31
CLP1_P
NTPase_1
AAA_18
Fer4_NifH
AAA_14
AAA_24
ATPase
Thymidylate_kin
NPHP3_N
AAA_17
AAA_33
YqeC
AAA_19
Lipoprotein_19
TsaE
MobB
Motif
Other DBs
NCBI-ProteinID:
UZD22391
LinkDB
All DBs
Position
4175771..4177111
Genome browser
AA seq
446 aa
AA seq
DB search
MFDNLSLKLDRAFKTLKGTGKITEINVATTVKEIRRALIDADVNYKVAKEVTDTIKSEAL
GRDVLISVSPGQLLVKITQEELTKLMGGTKEDIKLSGDPAVILISGLQGSGKTTFTGKLG
SYLKKQGRQVLLVACDIYRPAAIDQLKVLGEQIGVEVYAEPENKNAMEIATNAIAYAKKT
GKKTVVVDTAGRLAVDEAMMNEIEALKKGLNPSETLFVVDSMTGQDAVNTAKTFDERLDF
DGVVLTKLDGDTRGGAAISIRHVVNKPIKFISTGEKMENLDVFHPDRMAQRILGMGDVIS
LVERAQQSFDEDEAKRINSKIRTNNFNFDDFLSQLEQVKKMGNIKDLLGMIPGMGKAMKG
MDIDDDSFKPIEAIIRSMTPAEREHPDIIDGSRRKRLAAGSGRTIVEVNNLMKQFADMRK
MMKQMNKMGGAKAAMSKMLPPGMGKR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaagtttgaaactagaccgggctttcaagacactgaaaggaaccggt
aaaatcaccgaaataaacgtcgccacaaccgtcaaggagatcagaagagccctgatcgat
gccgacgtcaactataaagtcgccaaagaagtcaccgataccatcaagagcgaagcgcta
ggccgtgatgttttgatctctgtatctcccgggcagttattggtaaaaataacgcaagag
gagctgaccaaactgatgggcggcaccaaggaggatatcaagttgagtggtgatcctgct
gtgatcttgatttcaggccttcaaggctcgggtaaaaccacttttaccggaaaactcggt
agctacctgaagaagcaagggcgacaggttttgctcgtagcctgtgatatttaccgtcct
gctgcgatcgatcagttgaaagtattgggagagcagataggagtggaggtctatgcagag
ccagagaataagaatgcaatggagattgcaactaatgcgatagcctacgccaagaaaacc
ggaaagaaaacggtggtggtcgatacggcgggtcgtttggcagtggatgaagccatgatg
aatgagatcgaggcgctgaaaaagggcttgaatccgtcagagacactttttgtagtggat
tccatgactggtcaggatgcggtcaatacggccaagactttcgatgagcgattggatttt
gacggagtcgtattgactaaactagatggtgatactcgaggtggagcggcgatttccatc
cgtcacgtcgtgaataaaccgatcaagtttatttccacaggggagaagatggagaacctg
gatgtgttccacccagatcgtatggcacaaaggatcctgggaatgggagatgtgatttcc
ctggtagaaagagcccagcagtccttcgatgaggatgaagccaagcgaatcaattccaaa
atcagaaccaataactttaactttgatgattttctttctcagctagaacaggtgaagaaa
atgggaaatatcaaggacttgctaggaatgatccctggcatgggcaaagccatgaaggga
atggatatagacgatgattccttcaaaccaattgaagcgatcatccgctccatgacccct
gcagagcgtgagcatccggatatcatagatggaagtagaagaaaaaggttggcggcaggt
tctggtaggactatcgtggaggtgaataacctgatgaagcagtttgctgatatgcgtaag
atgatgaagcagatgaacaaaatgggaggtgccaaagctgcgatgagcaagatgcttcct
ccaggaatggggaaacggtga
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