Algoriphagus halophytocola: OM944_18435
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Entry
OM944_18435 CDS
T10580
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ahao Algoriphagus halophytocola
Pathway
ahao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OM944_18435 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahao03400
]
OM944_18435 (xseA)
Enzymes [BR:
ahao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
OM944_18435 (xseA)
DNA repair and recombination proteins [BR:
ahao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
OM944_18435 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
DUF4164
DUF6859
Motif
Other DBs
NCBI-ProteinID:
UZD22615
UniProt:
A0ABY6MHV8
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All DBs
Position
complement(4435774..4437084)
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AA seq
436 aa
AA seq
DB search
MQNARSISELNRLIQQALETELDPVIWVIGEIADFRSAPQGHAYFELVEKQGNTVQAKIR
ANSWAFAYRSIAAKFEAATGSRLKNGMKVLAQVSVNFHAVYGLSINVKDIDPSFSLGERA
RVRQETIDRLTQEGILRLNARHILPPVIQKIAVISSPTAAGYGDFINQLKSNSYGYHIYH
KLYPSTMQGNEAVNSILKSMDQLESDSEKLQLEAVVIIRGGGAQLDLDCFDEYRLAAKIA
NCPIPVLTGIGHERDETVSDLVAHTRLKTPTAVAEFLLSGFREFEENLGIALQRLDRTTR
QQLSNETGKMQQLAHQVKALSESRIKLEKEKVNSVVTRIKITTKGILASQANQLTGAERN
IRRGADSFLRSKTEELKSKELILKQLNPANILARGYTRTEVRGTPVNLANPKLGDMLKTH
SSNQTISSTITQIEEK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgccagatcgatatccgaactcaatcggctgatccaacaagccttagagacg
gagctagatccggtaatttgggtaataggcgagattgctgatttccgatcagcacctcaa
ggccacgcatattttgaactggtagaaaagcaaggcaataccgtacaggccaaaataagg
gcaaattcatgggcttttgcctaccgttcgatagccgccaaatttgaagccgctacaggc
tccagactgaaaaacggcatgaaggtcttggcgcaggtgtcggtaaatttccatgctgtc
tatgggctgagcattaacgtcaaagatattgacccttcattttccctgggtgaaagagca
agagtccgtcaagaaaccatagatcgattgacccaagaaggaattttgaggttaaatgcc
aggcatatcctccctcctgtgattcaaaaaatagccgtcatcagtagtcccacagcggca
ggttatggagatttcatcaaccaactgaaaagcaactcttacggatatcatatttaccat
aaactctacccttctaccatgcagggaaatgaggccgtaaattccattttgaaaagtatg
gatcagctggagtcggatagcgaaaaactacagttggaagctgtggtgatcatccgaggt
ggaggtgcgcaactggacttggattgtttcgatgaatacaggctagctgccaaaatcgca
aattgccctatccctgtgctcactggaataggtcatgagcgggatgaaaccgtttctgac
ctggtagcccatacccgattgaaaacgcccactgcagttgcggagtttttgctttcgggt
ttcagagagtttgaagaaaacctgggaattgcgctgcaaagactggacaggactacccga
caacagctctcgaatgaaaccggcaaaatgcagcaactcgcccatcaggtgaaagctttg
tccgaaagccgaattaaactggaaaaagaaaaagtcaattctgtagtcactcggataaaa
ataacaactaaagggattctagcttcccaggccaatcaacttaccggggcagaacggaat
atccgaagaggtgcagattcatttttgcgcagcaaaacagaggagctaaaatccaaagag
ctaattttaaaacaactcaatccggcaaatattttggccagaggctacaccagaaccgaa
gtccgtggtactccggtaaatctagccaacccaaagcttggggacatgcttaaaacccac
agctccaatcaaacgatcagtagtacaattacacaaattgaggaaaaatga
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