Algoriphagus halophytocola: OM944_18720
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Entry
OM944_18720 CDS
T10580
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ahao Algoriphagus halophytocola
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahao03000
]
OM944_18720
Transcription factors [BR:
ahao03000
]
Prokaryotic type
Helix-turn-helix
LacI family
OM944_18720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_11
HTH_10
Sigma70_r4
HTH_3
HTH_38
HTH_24
HTH_23
MarR_2
HTH_Tnp_ISL3
Sigma70_r4_2
TetR_N
HTH_28
MarR
TnsD
Xre-like-HTH
Sigma70_r3
HTH_36
HTH_Crp_2
Sigma54_DBD
Trp_repressor
Ig_TMEM131homol_3rd
HTH_29
MerR
HTH_5
GntR
NUMOD1
HTH_IclR
Mga
HTH_7
HTH_17
Crp
Sigma70_ECF
SpoIIID
Cro
HTH_8
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UZD22671
LinkDB
All DBs
Position
complement(4505576..4506595)
Genome browser
AA seq
339 aa
AA seq
DB search
MKKGHQVTMKEIAKKLGVSVSTISRALKDSPELHPETKRKIVEMAKEMNYQPNLLAQSLR
ISRTKTLGVIVPEITSHFFASCISGIQDFANTRGYNIMICQSNESIDLEMANIKTLVSSQ
VDALLISLSRETNHYEHLLDLYNREIPFLLFDRVNEDIPVSKVTFNDVGGAYEVTKHLLE
NGCKKVMYVSGPEDLYISKKRKEGYMQALEDFGVEFDPKMVKISNLTTEGNIKIGQEIAE
MKERPDGVFCMIDPVALDILAYWKEKGIRVPQDMALAGFTNNPSSAVVEPSLTTVAQPGY
EMGKLAVTHLLDQLDGIASDDPISIVLDTTLLPRKSTEK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaggtcatcaggtaacgatgaaagaaatcgccaagaaattgggggtatctgtt
tctaccatttcccgagcgctgaaagattctcctgaactccatcccgaaaccaaaaggaag
atcgtggaaatggccaaggagatgaattatcagcccaatcttctggctcaaagtctaagg
atttcacgcaccaaaactctgggggtaatcgtccctgagatcacttctcattttttcgct
tcctgcatcagtggcattcaggattttgccaacacccgcgggtataacattatgatttgc
cagtccaatgagtccatagacctggaaatggcaaacatcaaaaccttggtttcctctcag
gtagatgccctgttgatttcgctaagccgggaaaccaatcattatgagcatcttttggat
ttatacaacagagaaattccttttttgctttttgaccgggtaaatgaggacatccctgta
tccaaagtcaccttcaacgatgtgggaggagcttatgaggtaaccaagcacctgctggag
aacggttgcaaaaaagtgatgtacgtctccggaccggaggatctttatatttccaaaaaa
agaaaagaaggctacatgcaggcattggaggattttggagttgagtttgatccgaaaatg
gtcaaaatctccaatctcaccactgagggaaatattaaaatcgggcaagaaatcgccgaa
atgaaagaaagacccgacggtgttttctgtatgatcgaccctgttgccctggatattctt
gcttactggaaggagaagggcatccgagtaccacaggacatggcgctggctgggtttacc
aataacccttcctcagcagtggtagaaccctctctcaccactgtcgctcagcctgggtat
gagatggggaaacttgcggtcacacacctgctggaccagctggacgggatagcctcggat
gatcctatttctatagtattggacactactttgctcccaagaaagtcaacggagaaatag
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