Algoriphagus halophilus: V8V91_00580
Help
Entry
V8V91_00580 CDS
T10878
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
ahap Algoriphagus halophilus
Brite
KEGG Orthology (KO) [BR:
ahap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ahap02000
]
V8V91_00580
Transporters [BR:
ahap02000
]
Other transporters
Pores ion channels [TC:
1
]
V8V91_00580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
CooC_C
Big_1
phage_tail_N
Motif
Other DBs
NCBI-ProteinID:
XFE74769
LinkDB
All DBs
Position
104828..107911
Genome browser
AA seq
1027 aa
AA seq
DB search
MHSTLQVSKIICASACMMVWTGLVSPTHLSANGLENKGWLRTDAAVTSNLEIKQAISGVV
SDETGTPMPGATVRIKGTNNGTITDLDGKFSIEAEEGAILQISYVGYLLQEITISNQSSL
TIQLEPDAQQLDELVVVGYGTQKRSDVTGAIGSVKSEDFNKGVITNPVDLLQGKMAGVNI
TSTSGEPGATQNVIIRGIGSLRSGTQPLYVIDGFLLDNSSTGIATNPLSFLNPGDIASIE
VLKDASATALYGSRASNGVVVITTKKGKAGTSQINLSASTAWSSMAKKIDVFSADEFRRQ
VVGVGGNLEDFGGNTDWQDELTQVGFSKDINFSMSGANTENFSYFTSVGYQNQEGILKNS
NLERFSGKLNMNQKAFNGRLIVDYNLTASHTENLRPSITSTISDMLSLNPTIPTYTDGEP
TLLNTNALNPLKRYELYSDMAANNRILGTISPSFEILDGLTYKLNLGVDYSSTNRYQQYK
PYTAVINESNISDGTLDESISNNVNQLVENTLTYNWNNYLHNLTVLAGHSYQTFLDQYRA
TSYRGFADNNIEPRFQDHNSTSEYPTTVSSAAIKNELQSFFGRLNYVYADKYLFTATFRA
DGSSKFGENNKYGYFPSFALGWNVSKEDFMANSAFNNLKVRASWGQTGNQEIPSKITKAS
YSEDRLSTGSGSLNTYPIDTDGNSLDNYPYGIVFTRLANPDLQWEVSTQIDLGIDFALFD
SRITGTVDYFNKVSSNILLEVVPADPVQPTSTYWDNIKDMKIHNSGVELALDYNSDIQRD
FSYTIGGNVTFINNVVKDSPYSVLTTGAAQGAGQTGATINGYINNEPIGAFYMLQFDGIG
EDGLNRFKDINGDGQVLDDDRTVVGSAIPKVIYGIHTNFQYKAFDLSLNFNGTSGNKIYN
HTTMSLFTKAQLSRSNNTTDFAVEYPEESFNNSNTVSTRFLEDGSFFRLNNATLGYNLNT
QQVGLQNAFQNIRLSVTGQNLFVITNYSGFDPEVNTGSTSGGIQTFGVDRFTYPRARTFS
INLNLTF
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaactttacaagtttctaaaatcatttgtgcttcggcatgtatgatggtttgg
actggattagtaagtccaacacacctcagcgccaatggattggaaaataaggggtggcta
agaactgacgcagcagttaccagtaatctggaaattaaacaagcaatttcaggggtcgtt
tcagatgagacaggtacacctatgcctggggcgaccgtccggatcaaaggaaccaataat
ggtaccattaccgatttggacgggaaattttcaatagaggcagaagaaggtgccattctt
caaatttcctatgtaggctatcttttacaagagattacaataagtaatcaatcttcttta
actattcaattggagccggatgctcagcaattggatgaattagtcgtagtaggatatgga
acccaaaaacgatccgatgtcactggagcgattgggtcagtgaaaagcgaagattttaac
aaaggtgtcattactaacccggttgatttattgcaaggcaaaatggcaggggtaaatatt
acttccactagtggtgaaccgggagctacacagaatgtaatcattagaggtatcggtagt
ttacgttcaggaacgcaaccactttatgtgattgatggctttttattggataattcctct
actgggatagctaccaacccactaagctttttgaatcctggtgatattgcaagtatcgag
gttttgaaagatgccagtgccactgcactttatggttctagagcctctaatggggtagtg
gtaattactaccaaaaaagggaaagcaggaacatctcagatcaatttatctgcatctaca
gcttggtcttccatggcgaaaaaaatcgatgtattcagtgccgacgagtttcgtagacaa
gtagtaggagtagggggaaatttagaagattttggaggcaataccgattggcaagatgaa
ttgacacaggtaggcttttcaaaagatattaatttctccatgagtggggccaatacggag
aatttttcctacttcacttccgtaggctaccagaatcaggaaggaattttgaaaaactca
aatctcgagcgtttctccggtaaattaaatatgaaccaaaaagcgttcaacggcagatta
atcgtagactacaacctcacagcctctcatactgaaaacttaaggccaagcatcacttct
accatcagtgatatgttgagtttgaaccctaccatccctacctatacagatggtgaacct
accttattgaataccaatgccctcaatcctctaaagagatatgagctgtatagtgatatg
gcagcaaataaccggattttgggaaccatttccccttcttttgaaatcctagatgggctg
acttataaactcaatcttggcgtggattattcttccaccaatcgttaccagcaatacaaa
ccttataccgctgtcatcaatgaatccaatatttcagatggaaccctggatgaatcgatc
agtaataatgtgaatcaattggtagagaataccttgacctataactggaataattacctg
cataatttgactgtattggcgggtcattcataccagacatttttagatcaatatagagca
acttcttacagaggttttgcagataacaacatcgaacctaggtttcaagatcataatagt
actagcgaatatcctactacggttagctctgctgctattaaaaatgaattgcagtctttc
tttggccggttgaattacgtgtatgcagataagtatttgtttacagcaaccttccgagcg
gatgggtcctccaaattcggtgaaaataataaatatgggtacttcccatcttttgccttg
ggatggaatgtgagtaaagaagatttcatggccaattctgctttcaacaacttgaaagtt
cgtgcgagttggggacaaacaggaaatcaggaaattccttccaaaatcacaaaagcgagt
tattctgaagataggttgtctactggctcaggaagtttaaatacctatccaattgataca
gatggtaactccttggataattatccatatggaatcgtgttcacccgattggcaaatcct
gatttgcaatgggaagtttccactcaaatagatttggggatagacttcgcgttgtttgat
tctagaatcacaggtacagtggattatttcaacaaagtatcttccaatattttattggag
gtggttccggccgatcctgtgcagcctacatcgacttattgggacaatattaaagacatg
aagatccataatagcggggtggaattggctttagattacaacagtgatatccagcgggac
ttctcatataccattggaggtaatgtcacttttatcaataatgtggtaaaagattctcct
tattctgtattgactacgggagcagctcaaggagcgggtcagacaggggctaccatcaat
ggatatatcaacaatgagccaattggtgctttctatatgctgcaatttgacggaatcgga
gaggatggattgaatagatttaaagatatcaatggagatggtcaagtattggatgatgat
cgaactgtggtaggaagtgcgattccaaaagtcatctacggcattcataccaacttccaa
tacaaggcatttgacttaagcctgaatttcaatggtacttctggaaataaaatctacaat
cataccactatgtccttatttaccaaggcacaactttccagatccaataacactactgat
ttcgcagtagaatatcctgaagagtctttcaacaattcaaataccgtttctaccagattc
ttggaagatggttccttcttcaggttgaacaatgcaaccctaggctataacctaaatacc
cagcaggttggattacaaaatgcatttcagaatatacgactatcagtaactggccaaaac
ctgtttgtgatcaccaattattccgggtttgatcctgaggtcaatacaggatctacttct
ggtggaatccaaacctttggcgtggatcgctttacctaccctagagccagaaccttttca
attaacctgaatttaaccttctaa
DBGET
integrated database retrieval system
