Algoriphagus halophilus: V8V91_01305
Help
Entry
V8V91_01305 CDS
T10878
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ahap Algoriphagus halophilus
Pathway
ahap02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ahap00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V8V91_01305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahap03021
]
V8V91_01305
Transcription machinery [BR:
ahap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V8V91_01305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
UPF0122
HTH_28
Motif
Other DBs
NCBI-ProteinID:
XFE74896
LinkDB
All DBs
Position
238862..239725
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKISKQITNRESQSLDKYLQEIGKVDLLTADEEVVLAKRIREGDQLALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKTFSELEQRFEREPSPEELAEVLEVTASEVVDTMKISGRHV
SMDAPFVQGEENSLLDVLENDGDEKPDDGLMNDSLRKEVQRALSTLTQREADVITLYFGL
NGEHAMTLEEIGEKFNLTRERVRQIKEKAIRRLRHTSRSKTLKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagctaaaaattagcaaacagattaccaacagagaaagccagtcactggataaa
tatcttcaggagatcggtaaggtagacctgttaacagcagatgaagaggtagttctggcc
aaaagaatcagagaaggtgaccaattggcattggagaaattgacgaaagccaaccttcga
tttgtcgtttcagtagctaagcaataccaaaatcaaggtctttccctaggtgatttgatc
aatgaaggaaacttaggtttgattaaagctgctcagagattcgatgaaacccgtggtttt
aagtttatttcctacgctgtttggtggattagacaatcaatccttcaagcattggcagaa
cagtctagaattgttcgtttgcctttgaacagagttggttctttgaataaaatcagcaag
acctttagcgaattagaacagaggtttgaaagagagccttctccagaagaattagctgaa
gtacttgaagtaactgctagtgaagtagtggatacgatgaaaatctctggccgtcacgtt
tcaatggatgctccatttgtccaaggggaagaaaacagcctgttggatgtattggaaaat
gatggggacgaaaagccggatgatggattgatgaatgactctcttagaaaagaggttcaa
agagcactttctactttaacccaacgtgaggccgatgtgatcaccctttattttggactc
aatggggaacatgcaatgaccttggaagaaattggtgaaaaattcaatctaaccagggaa
agagtaaggcagattaaagagaaagccatcagaagattgagacatacttctagaagtaag
acgttgaagccctacttgggataa
DBGET
integrated database retrieval system
