Algoriphagus halophilus: V8V91_08435
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Entry
V8V91_08435 CDS
T10878
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ahap Algoriphagus halophilus
Pathway
ahap03030
DNA replication
ahap03430
Mismatch repair
ahap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V8V91_08435
03430 Mismatch repair
V8V91_08435
03440 Homologous recombination
V8V91_08435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahap03032
]
V8V91_08435
03400 DNA repair and recombination proteins [BR:
ahap03400
]
V8V91_08435
Enzymes [BR:
ahap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V8V91_08435
DNA replication proteins [BR:
ahap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V8V91_08435
DNA repair and recombination proteins [BR:
ahap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V8V91_08435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
FixQ
ATP_synth_reg
Motif
Other DBs
NCBI-ProteinID:
XFE76120
LinkDB
All DBs
Position
complement(1570250..1570831)
Genome browser
AA seq
193 aa
AA seq
DB search
MTLFLIVIALIVLYFIFKKKKKPEIIPNIPSREEQKTISIGYDDSDTGFKHYMVFDTETD
GLPIDKNGDPNDLDNWPRIVQLCWMILDSDFKLVEIKDRYIKVNFEIDPEAIKIHGITNE
KTETEGVLINEVMEEFLNDLETTEILVAHNLDFDVPIIDAELLRLGKKEESIASEKYVLS
SMVLELPDNMENI
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgactctttttttaatagttattgctttgattgttctttacttcatttttaagaaaaag
aaaaagccagagattattccaaatatcccttctcgagaagaacaaaaaacaatttccatt
ggatacgatgattctgatacaggatttaagcattatatggtattcgatactgaaacagat
ggacttccaatagataaaaatggtgatccaaatgatttagataattggccaaggattgtg
caattatgctggatgatattggattctgattttaaactggtggagattaaagacagatat
ataaaagttaattttgaaatagatccagaagcaattaaaattcatggtattacaaatgag
aaaacagagacagaaggagttcttattaatgaagtaatggaagaattccttaatgactta
gaaactactgaaattcttgtagcccacaatttagattttgatgtcccaataattgatgcg
gaattgcttcgacttggaaaaaaagaagagtctatcgcaagcgaaaaatatgtactctca
agtatggttctggaattaccagacaatatggagaatatataa
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