KEGG   Algoriphagus halophilus: V8V91_13275
Entry
V8V91_13275       CDS       T10878                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ahap  Algoriphagus halophilus
Pathway
ahap03030  DNA replication
ahap03430  Mismatch repair
ahap03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V8V91_13275
   03430 Mismatch repair
    V8V91_13275
   03440 Homologous recombination
    V8V91_13275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahap03032]
    V8V91_13275
   03400 DNA repair and recombination proteins [BR:ahap03400]
    V8V91_13275
Enzymes [BR:ahap01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     V8V91_13275
DNA replication proteins [BR:ahap03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     V8V91_13275
DNA repair and recombination proteins [BR:ahap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     V8V91_13275
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2 CAF1 DNA_pol_A_exo1 Rv2179c-like BTD APOBEC1 Mt_ATP-synt_D
Other DBs
NCBI-ProteinID: XFE76913
LinkDB
Position
complement(2453934..2454602)
AA seq 222 aa
MSWSLFKKKISPKSFVKDFLKEFKSTIPEIRQFDELSFVVLDTETTGLDLSKDHILSFGA
VKIQEQKIHISTAVEWYLASSKTGKDSIPVHGLLKNEEEISLESFAIQLLSYLGNHVIIG
HSINFDLAMLEKALRPFGLVDFPNSSIDTRDLAIRLDHGLMVDPSRLNFQDYTLDSLCKR
FKIETDDRHTAGGDAFLTANLFLKLLKLASKKGINNWGQLKK
NT seq 669 nt   +upstreamnt  +downstreamnt
atgagttggtcgttgttcaagaaaaagatttctccaaagtcctttgtcaaagattttctg
aaggagtttaaaagtactattcccgaaattaggcaattcgatgagttatcttttgtggtt
ttggatacagaaaccactgggcttgacctttccaaagatcatatattgtcctttggcgct
gtaaaaatacaagagcaaaaaatccatatttccacagcagttgaatggtatttagcttct
tccaaaacgggaaaagactccataccagtacatggtttactaaaaaatgaagaggagatc
tccttggaatcatttgctattcaactcttgtcttacttaggtaatcatgtgattataggc
cattccatcaattttgatttagcaatgttagaaaaagcgctaagaccttttgggctggtt
gatttcccaaactcaagtattgataccagagatttggcaattcgattagaccatggctta
atggtggatcctagtaggttaaactttcaggactacacgctagactcactttgcaaacga
tttaaaatcgaaacagatgatagacatacggctggaggagacgcttttttgacagctaat
ttatttttgaagctcttgaaacttgctagcaagaaaggcataaataattggggacagtta
aaaaaataa

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