Algoriphagus halophilus: V8V91_19885
Help
Entry
V8V91_19885 CDS
T10878
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ahap Algoriphagus halophilus
Pathway
ahap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ahap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
V8V91_19885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahap03021
]
V8V91_19885
03400 DNA repair and recombination proteins [BR:
ahap03400
]
V8V91_19885
Enzymes [BR:
ahap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V8V91_19885
Transcription machinery [BR:
ahap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V8V91_19885
DNA repair and recombination proteins [BR:
ahap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V8V91_19885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
XFE73334
LinkDB
All DBs
Position
3697915..3698904
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKADDFHGLFTFKPLEKGYGVTIGNALRRILLSSLEGYAITSIKIP
GVVHEFSTIEGVVEDVTDIILNLKQVRFKKVHEAFDGKITVEIKNQSVFTAGDIAKFTSS
FEILNPDLVICHIDESKNFEIEIMVEKGRGYLPAEESKPKEQVFGQIAIDAIFTPIKNVK
YSVENTRVEQKTDFEKLILEVSTDGSIHPEKALQESAKILIQHFMLFSDQTMVLDSTGVA
EPEPIDEEFLHMRKLLKTSLGDLDLSVRAFNCLKAADVKTLGDLAKLEISDMMKFRNFGK
KSLAELEQLIQEKGLTFGMDISKYKLDEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtccatactagcatttcaaatgcccgaaaaagtggtgatggaaaaggccgatgacttc
catggcttgtttactttcaaaccactagaaaaaggctatggagttactatcggtaacgcc
ctaagaagaattttgctttcttcgctggagggttatgccatcacatccattaagattcct
ggagtggtgcatgagttttctaccatcgaaggtgttgttgaagacgtgaccgatattatt
ttgaatttaaagcaggtgagattcaagaaagttcatgaggctttcgatggtaaaatcact
gtggaaatcaaaaatcagtctgtgttcactgcaggggacattgctaagttcacttcttct
ttcgaaatcttaaatccagatttggtgatttgtcacatcgacgagtctaaaaactttgag
attgagatcatggtcgaaaaaggaagaggatatctaccagctgaagaatccaaaccaaaa
gagcaggtattcgggcaaattgccatcgatgcgatctttactcctatcaagaatgtaaag
tacagcgttgagaatacccgtgttgaacagaaaactgactttgaaaagttgatcttggaa
gtatctactgatggctctatccacccggaaaaagcacttcaggagtctgctaaaatcctg
atccaacactttatgttgttctctgatcaaactatggtacttgactctacaggagttgct
gaaccagagccaattgacgaggagttcttgcacatgagaaaattgttgaagacatctttg
ggcgatctagatctttctgttcgtgcattcaactgtctgaaagctgctgatgtgaagact
cttggagatcttgccaaacttgaaatttcggatatgatgaaattcagaaactttggtaag
aaatctctcgcagagcttgagcaacttatccaagagaaaggtctgaccttcgggatggat
atttctaagtataaacttgatgaagaataa
DBGET
integrated database retrieval system
