Algoriphagus halophilus: V8V91_20770
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Entry
V8V91_20770 CDS
T10878
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ahap Algoriphagus halophilus
Brite
KEGG Orthology (KO) [BR:
ahap00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ahap01011
]
V8V91_20770
Enzymes [BR:
ahap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
V8V91_20770
Peptidoglycan biosynthesis and degradation proteins [BR:
ahap01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
V8V91_20770
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM_RLK
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
XFE73468
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Position
complement(3868857..3870437)
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AA seq
526 aa
AA seq
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MSKHKFSSLLFILTLFSSFSLLAQIPQVPAELEFADLIVRINPQARREIQLDVDAQYRNP
EYFKIKRERVNLYMPIIEDILRDNQVPEDLKYLVIQESSLIADAVSTSNAVGFWQFKQGT
AEEVFLRVDNQIDERKNIVSSTRGAALYLKKHNNTFDNWMCALVSYQMGLGGAKAYFGTR
YNGKRVVDVDRNTHWYFKKFLAHKIAFENQLGVLTSNSRMVEVPIQGPTTLAALAKKYGV
SESHLKEYNKWTSNGKIPGDRTYGLVYIQDGTLPVQPAIIKSSPSKNSSNSNNSFANSPA
YKQANSYPRISGNTTKASQPDQITVNDIEGVLASQTTTQSNFTDKIGIKEKKFRRLNDLD
PGERIEAGEYYYTKKKKSKAEVEHHIVMPGETLWSISQKYGIKLSSLKSKNRIRKDSDLK
VGMVLNLQDHRKRGEDIRVVNIKKAPPAQKAVVASNSSSTGPSKQERTSTSNSSSKGKIT
HVVSKGDTLFAISKKYGVTVNDLKSWNNIGSQNIISIGQKLVIFTP
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacataaattttcaagccttcttttcatcctcacgctcttcagtagcttttct
ttgcttgcgcagattccgcaagtacctgctgaattggagtttgcagatttaattgtaaga
attaatccacaagcgagaagggaaattcaactggatgtagatgctcaatatagaaacccc
gaatatttcaaaatcaagcgggaacgggtcaatttatatatgccgattatcgaagatata
ctccgagacaatcaagttcctgaagatttaaaatacctggtaatccaagaaagctccctc
atagccgatgcggtttctacctccaacgccgttggattttggcaattcaaacagggtact
gcagaggaagtatttcttcgcgtggacaatcagatcgatgaacgaaagaatattgtttcc
tctacccgtggtgcggctttgtatttaaaaaagcataacaacacttttgacaattggatg
tgtgctttggtttcctatcaaatgggactaggtggtgcaaaagcctattttggaacaaga
tataatggaaagcgcgtggtggatgtagacaggaatacgcattggtatttcaaaaagttc
ttggcccataaaattgcctttgaaaaccaacttggtgtactcacttcgaattctagaatg
gtagaagtccctattcaaggtccaactaccctagctgccttggccaaaaaatatggagta
tctgagtcgcatttaaaagaatacaataaatggacctctaatggtaagatcccaggcgat
agaacctatggattagtatatatccaggatggaacactaccggtacaacctgctattatt
aaaagtagtccatccaaaaacagttctaacagtaacaattcgttcgccaattcaccagct
tataagcaggctaactcctatccaaggatcagcggcaatacgacaaaggcgagtcagcca
gaccagatcaccgtcaatgatatcgaaggagttctagcctcacagactactacacagagt
aacttcactgataagattggtatcaaggagaagaaatttagaagactcaatgatcttgat
cctggagaaagaattgaagcgggagaatactactataccaagaaaaagaaatccaaagct
gaagttgagcaccatatagtgatgcctggagaaacactttggagcatctctcaaaagtat
ggaatcaagctttcttctttgaaatctaaaaaccgcatcagaaaagattctgacctgaaa
gtaggcatggtattgaatcttcaagatcaccggaaacgtggggaggatatacgggttgtc
aatatcaagaaagctcctccagcccagaaggcggtagttgccagtaactcaagctccacg
ggaccttcaaagcaagaaagaacctccacatccaattcaagttccaagggaaagattacc
catgtggtaagcaaaggtgacacgctttttgcgatcagtaaaaaatatggggttacagtc
aatgacttaaaatcctggaataacattggcagtcaaaacatcattagcatcggtcagaaa
ttggttatcttcacgccctga
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