Adlercreutzia hattorii: ADCFC_04000
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Entry
ADCFC_04000 CDS
T07732
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ahat
Adlercreutzia hattorii
Pathway
ahat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ahat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ADCFC_04000 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahat03021
]
ADCFC_04000 (rpoC)
03400 DNA repair and recombination proteins [BR:
ahat03400
]
ADCFC_04000 (rpoC)
Enzymes [BR:
ahat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ADCFC_04000 (rpoC)
Transcription machinery [BR:
ahat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ADCFC_04000 (rpoC)
DNA repair and recombination proteins [BR:
ahat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ADCFC_04000 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_A_CTD
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
BCA87781
UniProt:
A0A6F8SIS4
LinkDB
All DBs
Position
499362..503783
Genome browser
AA seq
1473 aa
AA seq
DB search
MTEFDVNNFDALRISLASAEDVRSWSRGEVKKPETINYRTLKPEKDGLYCEKIFGPTKDW
ECACGKYKRVRFKGIVCERCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGSPSRLGYLL
DIPPKELEKVLYFASSIITSVDKEAREEDIDDLRDELAADMEELDAERDRLIEATRKLST
DYVPEEDDFVDDLDDDERLTPEEVEEEIADIYEEFNERKALRQDAFDAFLKIEPKQLIGD
EALYREMRANYRDYFTGGMGAESVRDLLDAMDLEATSEELREVIATGKGQKRAKAVKRLK
VVDAFLKSDNKPSDMILDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRL
LDLGAPEIIINNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNL
LGKRVDYSGRSVIVVGPSLKLHQCGLPQQMALELFKPFVMKRLVELEYAANIKAAKRAVD
RGASYVWDVLEEVIVDHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCTAFNADFD
GDQMAVHVPLGAEAQAEARVLMLSSNNIKSPAHGHPLTVPTQDMIIGLYYLTAMRDGFPG
EGRMFIDFDDALNAYDARADLDLQAKIQVRLPYNTKVATAFGVFEDHKEGERIETSVGRI
IFNDVLPPDYPFLNYEMNKKEISRLVEDVTNTYDLSEVPPILDGLKDAGFHYATRAGVTV
SVYDATIPPSKPAILAQADERVAAIDEDYEMGLMSNEERHKQVVDIWNDANEEVGEAMAE
NFDKFNPIYMMAFSGARGNIKQIRQLAGMRGLMSDPKGEIIDRPIKANFREGLSVLEYFI
STHGARKGLADTALRTADSGYLTRRLVDVAQDVIIREIDCGTTEGVPYRVRNEKNEVDEN
LIGRCLLEDVVAPETGEILAEAGTYLHSMAQLRELDAAGIEEVTIRTIMTCHAEHGVCQK
CYGWDLATARPVNIGTAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITHGLPRVQELFE
ARKPKGQAVLAEISGTMQVTGDKMSKTITIHDQEGNYREYVVSARAQLLPGVFDGCEVRV
GQQLTKGSVNPHDLLRLTDPNTTLRYIVGQVQDVYVSQGVDINDKHIEVIARQMLRKVAV
LDAGDSDFLPGRQVNRFEFEKVANELIAEGKEPPVGQPLLLGITKASLATDSWLSAASFQ
ETTKVLTDAAIEGKTDHLASLKENVIIGKPIPAGTGLRRYRDVGLTYKGRPVEKVTGDAL
PDFAPDALREIEDLLPQPQDWSLDSDGYFNSSGSFGGYYSALSGHRGHNLSDEDARLYIY
DDLGVSQRWANKFSEAGIETVADLLGHTEEDLLRIEGIGVKAIEELKEGLAARDLMRVIE
DDLAASSDDMSQLLDMVFSPDDTILIGGDEPPTFNTDGEEMLGEALPPRSYQRNLEELDA
LLGNMGGLSSLGFGFTSAEDEAASNQAMEDGEE
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgacggaattcgacgtcaacaacttcgacgccctgcgcatttcgctcgcttccgccgag
gacgtgcgcagctggtctcgcggcgaggtaaagaagcccgagaccatcaactaccgtacc
ttgaagcctgagaaggacggcctgtactgcgagaagatcttcggtcccaccaaggactgg
gagtgcgcctgcggcaagtacaagcgcgttcgcttcaagggtatcgtctgcgagcgctgc
ggcgtggaggtcacccgctccaaggtgcgccgcgagcgcatgggccacatcgagctggcc
gcgcccgtgagccacatctggtacttcaagggctccccgtcgcgtctgggctaccttctg
gacattccgccgaaggagcttgagaaggttctgtacttcgccagctccatcatcacctcg
gtggataaagaggcccgcgaggaggacatcgacgacttgcgcgacgagcttgccgccgat
atggaagagctggacgccgagcgcgaccgccttatcgaggccacccgcaagctgtccacc
gactacgtgccggaggaggacgacttcgtcgacgatctcgatgacgacgagcgcctcacc
cccgaagaggtggaagaggagatcgccgacatctacgaggagttcaacgagcgcaaggcc
ctgcgccaggacgcgttcgacgccttcctgaagatcgagccgaagcagctcatcggcgac
gaggccctctaccgcgagatgcgcgcgaactaccgcgactacttcaccggcggcatgggc
gccgagtcggtgcgcgaccttctggacgccatggatctggaggcgacctctgaagagctg
cgcgaggtcatcgccacgggcaagggccagaagcgcgccaaggccgtgaagcgcctgaag
gtggtggatgcgttcctcaagtcggacaacaagccttccgacatgatcctggacgtcatc
ccggtcattccgcccgatctgcgccccatggtgcagctcgacggcggccgcttcgccacg
tcggatctgaacgatctgtaccgccgcgtcatcaaccgcaacaaccgcctgaagcgcctg
ctcgacctcggtgctcccgagatcatcatcaacaacgagaagcgcatgctgcaggaggcc
gtggactcgctgttcgacaacggccgtcgcggtcgccccgtgaccggccccggcaaccgt
ccgctgaagtccatctccgatatgctcaagggcaagcagggccgcttccgccagaacctg
ctcggcaagcgcgtcgactactccggccgttccgttatcgtcgtcggcccgtcgctgaag
ctgcaccagtgcggtctgcctcagcagatggcgctggagctgttcaagcccttcgtcatg
aagcgcctggtcgagcttgagtatgccgccaacatcaaggccgccaagcgtgccgtcgat
cgcggtgccagctacgtgtgggacgtgctggaagaggtcatcgtcgaccatccggtgctg
ctgaaccgcgcaccaaccctgcaccgtctgggcatccaggccttcgagccggtgctcgtc
gagggcaaggccatcaagctgcatccgctcgtctgcaccgccttcaacgccgacttcgac
ggcgaccagatggctgtgcacgtgccgctgggcgccgaggctcaggccgaggcccgcgtg
ctgatgctgtcctctaacaacatcaagtccccggcccacggccatccgctgaccgtgccg
acccaggacatgatcatcggcctgtactacctgacggccatgcgcgacggcttccccggc
gagggtcgcatgttcatcgatttcgatgacgccctgaacgcctacgacgcccgcgccgat
ctggacctgcaggccaagatccaggtgcgtctgccctacaacacgaaggtggccaccgcc
ttcggcgtgttcgaggaccacaaggagggcgagcgcatcgagacgagcgtcggccgcatc
atcttcaacgatgtgctgccgccggactatcccttcctgaactatgagatgaacaagaag
gagatcagccgcctggtcgaggacgtcaccaacacctacgatctgtccgaggtgccgccg
attctcgacggtctgaaggacgccggtttccactacgccacccgcgccggtgttaccgtg
tcggtgtacgacgccaccatcccgccctccaagccggccattctcgcccaggccgatgag
cgcgtcgccgccatcgacgaggactacgagatgggcctcatgtccaacgaggagcgccac
aagcaggtcgtcgacatctggaacgatgccaacgaggaagtcggcgaggccatggcggag
aacttcgacaagttcaaccccatctacatgatggccttctccggcgcccgaggcaacatc
aagcagattcgccagctcgccggtatgcgcggccttatgtccgacccgaagggcgagatc
atcgaccgtccgattaaggcgaacttccgcgagggtctgtccgttctggaatacttcatt
tccacccacggcgcccgcaagggcctggccgacacggcgcttcgtaccgccgactcgggt
tacctgacccgtcgtctggtggacgtggcccaggacgtcatcatccgcgagatcgactgc
ggcaccaccgagggcgtgccctaccgtgtgcgcaacgagaagaacgaggtggacgagaac
ctcatcggccgctgccttctggaagatgtggtggcgcccgagaccggcgagatcctcgcc
gaggccggtacctacttgcactccatggctcagctgcgcgagcttgatgcggccggcatc
gaggaggtcacgatccgtacgatcatgacctgccatgccgagcacggcgtctgccagaag
tgctacgggtgggatctggccactgcccgtccggtgaacatcggcacggcggtgggcatc
atcgccgcccagtccatcggcgagcccggcacccagctgacgatgcgtacgttccacacc
ggcggcgttgccggcgaggacatcacccatggtctgccccgtgttcaggagctgttcgag
gcccgcaagcccaagggccaggcggtgctcgcggaaatctccggcaccatgcaggtcacc
ggcgacaagatgtcgaagaccatcaccatccacgaccaggagggcaactaccgcgagtac
gtggtgagcgcccgtgcccagcttctgccgggcgtgtttgacgggtgcgaggtgcgcgtg
ggccagcagctgaccaagggttccgtgaacccccacgaccttttgcgcctcactgatccg
aacacgacgctgcgctacatcgtgggccaggttcaggacgtgtacgtgtcccagggcgtg
gatatcaacgacaagcacatcgaggtcatcgcgcgccagatgctgcgcaaggtggccgtg
cttgatgccggcgactccgacttcctgccgggccgtcaggtgaaccgcttcgagttcgag
aaggtggccaacgagctgatcgccgagggcaaggagccgccggtgggccagccgctgctg
ctcggcatcaccaaggcgtcgctggcaacggattcgtggctgtccgccgcgtcgttccag
gagaccaccaaggtgctcaccgacgccgccatcgagggcaagaccgatcacttggccagc
ctgaaggagaacgtcatcatcggcaagcccattcccgccggcacgggtctgcgtcgctac
cgcgatgtgggtctcacctacaagggccgtccggtggagaaggtcaccggggacgcgctg
cccgacttcgcgccggatgcgctgcgcgagatcgaggatctgctgccccagcctcaggat
tggtcgctcgacagcgacggctacttcaactcctcgggctcgttcggtggctactacagc
gctctttcggggcaccgcggccacaacctgtccgacgaggacgcgcgcctgtacatctac
gacgatctgggcgtgtcccagcgctgggcgaacaagttctccgaggcgggcatcgagacc
gtggccgacctgctgggtcataccgaggaggatctgctgcgcatcgagggcatcggcgtg
aaggccatcgaggagctgaaggagggcttggcggcccgcgacctcatgcgcgtcatcgag
gacgacctggcggcttcctccgacgacatgagccagctcttggacatggtgttctcgcct
gacgacaccatcctcatcggcggcgacgagcccccgacgttcaacaccgacggcgaggag
atgctcggcgaggcgctgcctccgcgctcctaccagcgcaaccttgaagagctggacgcg
ctgctcggtaacatgggcggcttgagctccctcggcttcggcttcaccagcgctgaggac
gaagcggcttccaaccaggccatggaagacggcgaggagtaa
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