Anaeromicropila herbilytica: bsdtb5_02290
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Entry
bsdtb5_02290 CDS
T08766
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ahb
Anaeromicropila herbilytica
Pathway
ahb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bsdtb5_02290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahb03019
]
bsdtb5_02290
03009 Ribosome biogenesis [BR:
ahb03009
]
bsdtb5_02290
Enzymes [BR:
ahb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
bsdtb5_02290
Messenger RNA biogenesis [BR:
ahb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
bsdtb5_02290
Ribosome biogenesis [BR:
ahb03009
]
Prokaryotic type
rRNA helicases
bsdtb5_02290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Hyccin
AAA_19
CMS1
Cas3-like_C_2
UBA_7
Motif
Other DBs
NCBI-ProteinID:
BCN28934
UniProt:
A0A7R7EHR9
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All DBs
Position
302937..304535
Genome browser
AA seq
532 aa
AA seq
DB search
MQTVRFDELGIDPQILKAIEEMGFEEASPIQAKAIPAAMTGKDIVGMAQTGTGKTAAFGI
PLLHGIDPKDKKLQAVVLCPTRELAIQVAEEIRKLAKFMHGVKVLPIYGGQEISKQIRSL
KAGTQVVIGTPGRVMDHMRRKTVKFDTVKTIILDEADEMLNMGFREDIETILQEVPEERQ
TVLFSATMAKSIMDITKNFQKDAEIIKVIRKEITVPQIEQYYYEVKPKNKEEVLSRLLDI
YNPKLSLVFCNTKRQVDELVTALQGRGYFAEGLHGDLKQQQRDRVMNGFRNGKTEILIAT
DVAARGIDVDDVEAVFNYDVPQDDEYYVHRIGRTGRAGRTGRAFTFVVGKEIYKLKDIQR
YCKTKITLQPIPSIDDVANTKSEKILEKIDKIIKNEDLSNMIHLIEERINDEDVTSLEIA
AAFLKMTMGEDNEQIEEGKSANYEDYGDTGAEAGMVRLFINIGKKQNARPGDILGAIAGE
TGMPGKLIGSIDMYDKYTFVEVPREHAKDVIQVMQDAKIKGKSINIEPANKK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcagacagttagatttgatgaattaggaattgacccacagattcttaaagcaattgag
gagatgggatttgaagaagcaagtcctattcaagcgaaagcaataccagccgctatgaca
ggtaaagatatcgttggtatggcacagacaggaacaggtaaaacagcagcatttggtatt
ccattattacacggaattgatccaaaagataagaaattacaagcagttgttttatgtcct
acaagagaacttgctattcaagtagcagaagagattcgtaagcttgcaaagttcatgcac
ggtgtaaaagtccttcctatctatggaggacaagaaataagcaaacagattcgttcactt
aaggctggtacacaagtagtaatcggtacaccaggtcgtgttatggatcatatgagaaga
aagacagttaaatttgatactgttaagacaattattcttgatgaagcagatgaaatgtta
aatatgggattccgtgaagatatcgagacaatcttacaagaggttccagaagaaagacaa
acagttctattctctgcaactatggcaaagtctattatggatatcactaagaacttccaa
aaggatgctgagattatcaaggttattcgtaaagaaattacagttcctcaaatagaacaa
tattactatgaagtaaaacctaagaataaagaagaagtactatcaagattactagatatc
tataatccaaaattatctttagtgttctgtaacacaaagagacaagttgatgagttagta
actgcacttcaaggtagaggatactttgcagaaggacttcatggagacttaaagcaacaa
caaagagatcgtgttatgaatggattccgtaatggaaagactgaaatacttatcgcgacg
gatgttgcagctagaggtatcgacgttgatgatgtagaagctgtatttaattatgatgtt
cctcaagatgatgaatattatgttcatagaatcggaagaacaggtagagctggaagaact
ggtagagcctttactttcgtagtaggtaaagaaatctataagttaaaagacattcaaaga
tactgtaagactaagattactcttcaaccaattccatcaattgatgatgtagctaataca
aaatcagaaaagattcttgaaaaaatcgataaaattattaaaaatgaagatctatccaat
atgattcatttaatcgaagaaagaattaatgatgaagacgttacatcacttgagattgca
gcagcattcttaaagatgacaatgggtgaagacaacgaacagatcgaagaaggtaaatca
gctaactatgaagattacggtgatactggagccgaagctggaatggttcgtctatttatc
aatatcggtaagaaacaaaatgcaagaccaggagatatcttaggtgcaatcgctggtgaa
actggaatgccaggtaaattaattggaagtatcgatatgtatgataaatatacattcgtt
gaagttccaagagaacatgcgaaagacgttatccaagtgatgcaagatgctaagatcaaa
ggtaagagcattaatatagaaccagcgaataagaaataa
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