Anaeromicropila herbilytica: bsdtb5_27050
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Entry
bsdtb5_27050 CDS
T08766
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ahb
Anaeromicropila herbilytica
Pathway
ahb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bsdtb5_27050 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahb03019
]
bsdtb5_27050 (rny)
Messenger RNA biogenesis [BR:
ahb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
bsdtb5_27050 (rny)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF2536
PIG-S
Motif
Other DBs
NCBI-ProteinID:
BCN31410
UniProt:
A0A7R7EM39
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All DBs
Position
complement(3146323..3147876)
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AA seq
517 aa
AA seq
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MDILTLVITFIVTFVITAPVAWKIATSYRIKVVEAKIGSAEDKAREIIDEAIKSAETKKR
EALLEAKEESLKTKNEIEKETKERRSELQRYEKRVLSKEETLDRKTEALEKKESKLTLKE
NELDRLKSEVEDFHSKQLQELEKISGFTSEQAKDYLLKTVEDEVKHETAMLVKELENKAK
EEADKKAKEYVVTAIQKCAADHVAETTISVVQLPNDEMKGRIIGREGRNIRTLETMTGVD
LIIDDTPEAVILSGFDPMRREVARIALEKLIIDGRIHPARIEEMVEKAQKEVEVMIREEG
EAALLEVGVHGIHPELVRLLGKMKFRTSYGQNTLKHSIEVAHLSGLLAGEIGVDVRMAKR
AGLLHDIGKSVDHEMEGSHVQIGVDLCRKYKESPIVINAVESHHGDAEPETLIACIVQAA
DTISAARPGARRETLETYTNRLKQLEDITNGFKGVDKSFAIQAGREIRVMVVPEQINDAD
MILLARDLSKQIESELEYPGQIKVNVIRESRVIDYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtggatatattaactttagtaatcacatttattgttacttttgttataacagctcctgtc
gcttggaaaattgcaacttcctaccgtattaaagttgttgaggctaaaataggtagtgca
gaagacaaggcaagagaaatcatagatgaagctattaagtcagcggaaactaagaaaaga
gaagccctactcgaagcgaaggaagagtctttaaagactaagaatgagatcgagaaggaa
acaaaggaacgtcgaagtgaattacaacgttatgaaaagcgtgttctatctaaagaagaa
actcttgatagaaagactgaagcacttgagaagaaagaatctaagcttactttgaaagaa
aatgaactagacagattaaaatcagaagtggaagactttcatagcaagcaattacaggag
ttagaaaaaatttctggatttacctccgaacaagcgaaagattatcttttaaaaactgtt
gaagatgaagttaaacatgaaacggcaatgttagtaaaggaacttgaaaacaaagcaaaa
gaagaggctgacaaaaaagcgaaagaatatgttgtaacagcgattcaaaaatgcgcagct
gaccacgttgcagaaactacaatttcagttgttcaacttcctaatgatgagatgaaggga
agaattattggtagggaaggacgtaatattcgtactttagaaaccatgactggggtagat
ttaattattgatgatactccagaagcagtaatcctatccggatttgatccaatgagaaga
gaagtagctagaattgcacttgaaaaattaattattgatggaagaatacatccagcaaga
attgaagagatggtggaaaaggctcaaaaagaagttgaagttatgattcgtgaagaaggc
gaagccgcactattagaagtaggagttcatggtattcatcctgaactagtccgcttactt
ggaaagatgaagtttagaacaagttatggacaaaatactttaaagcattcaatcgaagtt
gcacatttatctgggcttttagctggtgagattggtgttgatgtaagaatggcgaaaaga
gccggattattacatgacataggtaaatcagttgaccacgaaatggaaggttctcatgtt
caaataggtgtagatttatgtagaaagtacaaagaatctcctattgttattaatgcagta
gaatctcatcatggagatgctgaacctgaaacgttaatcgcttgtattgttcaagcagct
gatacaatatctgctgcaagacctggtgcgagaagagaaacgttagaaacttacacaaac
agattgaaacaattagaagatattacaaatggctttaaaggggtagataagtcctttgca
atacaagctggtagagaaatacgagttatggttgtaccagaacaaatcaatgatgctgat
atgattttacttgctagagacttatcaaaacaaattgaatctgaattggaatatccaggt
cagattaaggtaaatgttataagagaatcaagagtcatagattacgcaaaataa
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