Anaeromicropila herbilytica: bsdtb5_28360
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Entry
bsdtb5_28360 CDS
T08766
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ahb
Anaeromicropila herbilytica
Brite
KEGG Orthology (KO) [BR:
ahb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahb03032
]
bsdtb5_28360 (topA)
03400 DNA repair and recombination proteins [BR:
ahb03400
]
bsdtb5_28360 (topA)
Enzymes [BR:
ahb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
bsdtb5_28360 (topA)
DNA replication proteins [BR:
ahb03032
]
Prokaryotic type
DNA Topoisomerases
bsdtb5_28360 (topA)
DNA repair and recombination proteins [BR:
ahb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
bsdtb5_28360 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
BCN31541
UniProt:
A0A7R7EMD6
LinkDB
All DBs
Position
complement(3296094..3298172)
Genome browser
AA seq
692 aa
AA seq
DB search
MPKYLVIVESPAKAKTIKKFLGANYEVLASNGHVRDLPKSQLGIDIEHGFEPKYITIRGK
GDLLAKLRKEVKKADKVYLATDPDREGEAISWHLSKALKLEEDKTNRITFNEITKNAVKS
SIKEARDIDMNLVNSQQARRMLDRMVGYRISPLLWAKVKRGLSAGRVQSVALRIICDRED
EINAFIPEEYWSLDGEFKAKGCKKPLNAKFHGDTHGKITIHSKEELEHILNEIEGAEFEV
VDVKKSERVKKAPLPFTTSTLQQEAAKQLNFSTQKTMRIAQQLYEGVDVKGSGTIGLITY
LRTDSTRISEEADASAKVFIGENYGADFLVQGDNTKASSKKIQDAHEAIRPTYVEQTPTR
VKESLSRDQFRLYQLIWKRFVASRMASAKFETVSIKIEGNGYRFTTSTSNLLFEGFMTVY
NDGEEDQEVNKDLNLITKETKLTVQGFEEKQHFTQPPAHYTEASLVKALEELGIGRPSTY
APTITTIIARRYVAKENKNLYVTELGEVVNHIMRQSFPSIVDVNFTVNLESLLDRVEDGA
VNWKTIVSNFYPDLEDAVNQAEKELEQVTIEDEVTDVICEECGRNMVVKYGPHGKFLACP
GFPECRNTKPYLEKIGVECPECKGDIVIRKTKKGRKYYGCENYPECEFMSWQKPSVEKCP
KCGKILLEKGKNLVCIDNACGYVKNVKNIQNE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagtatcttgtgatagtagaatcacctgcaaaggcaaaaacaattaagaaattt
ttgggtgcaaattatgaggtgttagcatcgaatggacatgttagagatttacctaagagt
caattggggattgatatagagcatggttttgaaccaaagtatataacaataagggggaag
ggagatttattagcgaaacttcgaaaagaagtaaaaaaagcggataaagtgtatctcgca
actgaccccgatcgtgaaggagaagcaatatcctggcatttatcaaaggcgcttaagtta
gaagaagataaaacaaatcgtatcacttttaatgaaatcacaaaaaatgcagtcaaatct
tctattaaagaagcaagagatattgatatgaatctagtaaattcacaacaagcaagaaga
atgctagatcgtatggttggatatagaattagcccattgttatgggcgaaagttaaacgt
ggattaagtgctggtagagtgcaatctgtagcacttcgaattatctgtgatagagaagat
gagattaatgcattcattccagaagaatactggtcgttggatggtgaatttaaagcaaaa
ggttgtaaaaaaccattaaatgcaaaattccatggtgatacacatggaaaaattactatt
cattcaaaagaagagttagaacatattttgaatgaaattgaaggggctgaattcgaagtt
gttgatgtgaagaaaagcgaaagagtaaaaaaagctccgcttccttttactactagcaca
ttacaacaagaagctgctaaacaacttaacttttcaacacagaaaacgatgagaatagca
caacaactttatgaaggtgttgatgtgaaagggagcggtaccattggtttgattacttac
ctacgtactgattcaactcgtatctcagaagaagcggatgcaagtgcaaaagtatttatt
ggtgaaaattatggtgcagacttcctggtgcaaggagacaatacaaaggcatcttcgaaa
aagattcaagacgcacatgaggcaataagacctacttatgtagaacagacccctactagg
gtaaaagaatccttgagccgagatcaattccgtctatatcaattaatatggaaacgtttt
gttgcaagtagaatggcatctgccaaattcgaaacagtatccataaaaatagaaggaaat
gggtatcgttttactacatctacttctaatttgttatttgaaggttttatgactgtttat
aatgacggggaagaagaccaagaagtgaataaggatttgaacttgataacaaaagagact
aaacttacagtacaagggtttgaagaaaagcagcattttacccaaccaccagcgcattac
acagaagcttccttagtaaaggcacttgaagaactgggaattggtcgaccaagtacttat
gcaccgactattacaactattattgcaagaagatatgttgcaaaagaaaataaaaattta
tatgttacagagcttggtgaggtagtaaatcatattatgcgacaatcatttcctagcata
gtagatgtaaattttaccgttaatttagagtcattgcttgatagagtagaagatggtgct
gttaactggaaaacgattgtaagtaatttctatccagacttggaagatgcggtaaatcaa
gcagagaaagaacttgaacaagtgacaatagaagatgaggttactgatgtaatatgtgaa
gaatgcggtagaaatatggttgtaaagtatggtccgcatggaaagttcttagcatgtccg
ggatttccagaatgtcgtaatacaaaaccatatttagagaaaatcggtgtagaatgtcca
gagtgcaagggggatatcgttatccgtaaaacgaaaaaaggtcgtaaatattacggatgt
gagaattatcctgaatgtgaatttatgtcatggcaaaaaccttcagttgaaaaatgtccg
aagtgtggtaagatacttttagagaagggtaagaatctagtatgcattgataacgcttgc
ggatatgtaaaaaatgtaaaaaacatacaaaatgaataa
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