Anaeromicropila herbilytica: bsdtb5_28500
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Entry
bsdtb5_28500 CDS
T08766
Symbol
spoVD_1
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
ahb
Anaeromicropila herbilytica
Pathway
ahb00550
Peptidoglycan biosynthesis
ahb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ahb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
bsdtb5_28500 (spoVD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ahb01011
]
bsdtb5_28500 (spoVD_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
ahb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
bsdtb5_28500 (spoVD_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
DUF3877
CBL
Toprim_3
Mitoc_L55
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
BCN31555
UniProt:
A0A7R7EM83
LinkDB
All DBs
Position
complement(3313110..3315044)
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AA seq
644 aa
AA seq
DB search
MMKNKTYNRRNLTVVVSIIILVSACLMGRLAYLMIFKSEYYAARAKVLHERERAIKAERG
IIYDRNGVAIATNKPVSTISVIHSQITDPEKVIDVLSSLLSLSEDKVRKRVEKVSSIEKV
KSNVDKEIADKIREYDLDGVMVDEDYKRYYPFSSLASKVIGFTGSDNQGIIGLEVKYEDF
LKGIDGQILTLTNARGVEIPNAAEDRIEPQAGDNLYLSLDVNIQKYAEQAAKKVYEAKQA
KSVKVIILNPKNGEIYSMVNIPEFDLNDPYTLNTEVGTTLTSKQKNDLLNNMWRNACISD
TYEPGSTFKIVTATAALEEGVVKLTDNFYCPGYAVVEDRKIRCHKTSGHGAETFVDGIKN
SCNPVFIEIGSRVGAKNMYKYYDRLGLFQKTGVDEPGEASSIFHKIDNVGAVELATMSFG
QSFQITPLQLLKAASSIVNGGNAITPHFGVKITNEQGDLVKNLTFKTSDNVVSKKTSDTM
KELLEAVVTSGGGQRAYLPGYHIGGKTATSQKLPRGNGKYISSFIGFAPANDPQVMAMVL
IDEPVGIYYGGTIAAPVVKEIFDNILPYLGIQPRYTEEEMKKNNIGEITVPNLVGMDLKK
AKELISTYEFGEIHYLGEGTKVVEQFPLSGEKVDKNSSLILYLE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagacgtataatcgtaggaatttaacagttgttgtttctatcataatt
ttagtatccgcatgtttgatgggaagacttgcctatttaatgatatttaaatctgagtat
tatgccgcaagagcgaaagtcttacatgagagagagagagcaattaaagctgaaagagga
attatctatgatagaaatggtgttgctattgcaacgaataagccggtttctacaatctca
gtgattcatagtcagataactgatccagaaaaagtaattgatgtactatcctccttgctt
agtttgagtgaagataaagtgagaaaaagagttgaaaaagtatcttctatagaaaaagta
aaatcaaacgtagataaggagattgctgataaaataagagaatacgatttggatggagtg
atggtagatgaagattataaaagatattatccatttagttcattggcatcaaaggttata
ggatttacaggatccgataatcaaggaatcataggtctagaggttaaatatgaagatttc
ttaaaaggaatcgatggccaaatattaacactaactaatgcaaggggagtagagattcca
aatgcagccgaagatcgaatagaaccacaagcaggagataatctatatctaagcctagat
gttaatatacaaaagtatgcagaacaagcagctaagaaagtatatgaggcaaaacaagcg
aaaagtgtaaaggtaattattctgaatcctaagaatggcgaaatctattctatggtaaat
atacctgagtttgatttgaatgatccttatactttaaatactgaggttggtactacattg
accagtaagcagaaaaatgatcttctaaacaatatgtggagaaatgcatgtatcagtgat
acttatgagccaggatctacttttaagattgtcactgcaactgcagcgctagaagaagga
gttgtaaaattaactgataacttctattgtcctggatatgctgtggtagaggatagaaag
attcgctgtcataagacatcggggcatggagctgaaacttttgttgatggaattaagaat
tcatgcaatcctgtatttatcgaaattggttcaagagtcggtgctaaaaatatgtacaaa
tattatgataggttaggtctgtttcaaaaaactggagttgatgagccaggtgaggcttcc
tctatttttcataagatagataatgttggtgcggttgagttagctactatgtcttttggt
caatcttttcagataacgcctttacaactattaaaagcagcaagttctatcgtaaatgga
ggtaatgcaattactcctcactttggtgttaagataacaaatgaacaaggagatttggtg
aaaaatcttactttcaagaccagtgataatgttgtatctaagaaaacaagtgatacgatg
aaggaactattagaagcagttgtaacttctggtggtggtcaaagagcctatcttcctgga
tatcatattggaggtaagactgcgacatctcagaaacttccaaggggaaatggtaagtat
atctcttcttttattggatttgcaccggcaaatgatccgcaagtaatggcaatggttcta
attgatgaaccagtaggtatttattacgggggtacaattgcagcgccagttgtgaaagaa
atatttgataatatccttccttatctcggaatccaaccaaggtataccgaagaagaaatg
aaaaaaaataacattggtgaaataacagtacctaatttagttggtatggatttaaaaaaa
gcaaaagagttaatctctacctatgaatttggagagatacattacctaggagaaggcaca
aaagtggtggaacaattcccattaagtggtgaaaaagttgataagaatagtagcttgatt
ctatacttggaatag
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