Anaeromicropila herbilytica: bsdtb5_40650
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Entry
bsdtb5_40650 CDS
T08766
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ahb
Anaeromicropila herbilytica
Pathway
ahb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bsdtb5_40650 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahb03019
]
bsdtb5_40650 (recQ)
03400 DNA repair and recombination proteins [BR:
ahb03400
]
bsdtb5_40650 (recQ)
Enzymes [BR:
ahb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bsdtb5_40650 (recQ)
Messenger RNA biogenesis [BR:
ahb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
bsdtb5_40650 (recQ)
DNA repair and recombination proteins [BR:
ahb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
bsdtb5_40650 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
HTH_23
Sigma70_r4_2
Cas3-like_C_2
Sigma70_r4
HTH_10
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BCN32770
UniProt:
A0A7R7EPN0
LinkDB
All DBs
Position
complement(4786326..4788581)
Genome browser
AA seq
751 aa
AA seq
DB search
MTKLYEALKKYFGYDNFRENQEDIILHILEGTDVLGIMPTGAGKSLCYQLPAILSKGITL
VVSPLISLMKDQVDYLNSVGIESAYLNSSLSGAEYSFIIQGIYQKRYKMIYVAPERLENE
SFLKTINEMNIEISNVVIDEAHCVSRWGHDFRPSYTRIMQFINQLHIRPTVAAFTATATT
NVKEDIVHSLDLKSPEVYITSFDRKNLEFKVFVNENKEQYIRNYITNHVDESGIIYAATR
KDAEKLNQYLSGHNINVSIYHAGLSDADRMRAQEDFIYDNVQVMIATNAFGMGIDKSNVR
YVIHYNMPRDLEAYYQEAGRAGRDGENSVCILLYSAADTAIQKYFIDESDVSEELKSHEY
KKLQLMESYCHTSTCLRRYILEYFGDYSLTEPCGNCSVCNTEVEEKDVTIQAQMILSCIH
RSGQRFGRSIIVDTLRGSRNQKVLKFNLNELKTYGLMKDYPKDDLDLLMNRLIADGYIYK
TEEQYPILKLTNLSIPLLKNETSLTIQVAKQEKKVHADNSLLNKLKEIRSQIAKKEGYPP
YVIFHDSTLIEMSIQKPKTLDELGEIKGVGENKRIKYGRIFLDVLLEYENPEKKEEKNVE
AQEEIKVKSNSNYKMDDIQNGFNEARIVPRDNSDVDEICNDNNSGNVEEVFHKYYHLYKE
DNTIEEIASILGVKDSTVEKNLLKAYESGEAILIDDFIQKEYETEIINIILLDEWDGRLR
YIKDHVDEKVTYRTIKAVIIKLKTKINKFEL
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagttatacgaagctttaaaaaaatattttggatatgataatttccgagaaaat
caagaagatattatcttacacatcttagaaggtactgatgttttaggaattatgccaact
ggtgctggaaaatctttatgttatcaactacctgctattctgtcgaagggcataactctt
gttgtatcgccattaatttctttaatgaaagatcaagttgattatcttaatagtgttgga
attgaatctgcatatttaaatagttcattatcaggagctgaatattcttttattatccaa
ggaatatatcagaagagatataaaatgatatatgttgctcctgagcgtttggagaacgaa
tcttttcttaagacaataaatgaaatgaatatagagattagcaatgttgtaattgatgag
gcacattgtgtatcaagatggggacatgattttagaccgagttatactagaataatgcag
tttattaatcaattacatattcgtccaacagttgctgcatttacagctactgcaacaaca
aatgttaaggaggatattgttcattctttagatcttaagagtcctgaagtatatattaca
agttttgatcgaaagaatcttgaatttaaagtgtttgttaatgaaaataaggaacaatat
attcgaaattatataaccaatcatgtagatgagagtggaattatctatgctgcaacaaga
aaagatgcggaaaaattgaatcaatatttatctggtcacaacataaatgtttcaatatat
catgctgggctatcggatgcagatagaatgagagcacaagaagattttatatatgataac
gtacaggttatgattgctacaaatgcatttgggatggggattgataaatccaatgtcaga
tatgttatccattataatatgcctagagatttagaagcttattatcaagaagcagggcgt
gcgggacgtgacggtgagaacagcgtgtgtatactgttgtattcagcagctgatactgca
attcaaaaatattttatcgatgaaagtgatgtttcagaagaattaaaaagccatgagtat
aagaaacttcaacttatggaaagttactgtcatacatctacatgtttgagaaggtatata
ttagaatactttggggattactcattgacagagccttgtggtaattgtagtgtatgtaat
acagaagttgaagaaaaagatgttacaatacaagctcagatgatattgtcttgcatacat
cgttctggtcaaaggtttggaagaagtattatagtagatacgttaagggggtcaagaaat
caaaaagttctcaaattcaatctaaatgaactaaaaacctatggactaatgaaagattat
cccaaagatgatttagatttgttgatgaatcgtttgattgcggatggatatatatataag
acagaggaacaatatccaatcttaaaattaacaaatctttcaattcccttgttgaaaaat
gagacatcattaacgatacaagtagcgaaacaggaaaagaaagttcatgcagataacagt
ctgttaaataaattaaaagagattagatctcagatagccaagaaggaagggtacccgcca
tatgtaatattccatgactctacattaattgagatgagtattcaaaaaccaaaaacatta
gatgaattaggagaaataaagggtgtcggagaaaataaaagaataaaatatggtagaata
tttcttgatgtattactggagtatgagaatccagaaaagaaagaagagaagaatgtagag
gcacaggaagagattaaagttaaaagcaattccaattataagatggatgacattcaaaat
ggttttaatgaagctagaatagtgcctagagataattcggatgttgatgaaatttgtaat
gataataattcagggaatgtagaagaagtatttcataaatattatcacttatataaggaa
gacaatacaatagaagaaatagcaagtatattgggagtaaaagattcaacagttgagaaa
aacctacttaaggcgtatgaatcaggagaagctatattgattgatgacttcatacaaaaa
gagtatgaaactgaaataattaacataattcttttagatgaatgggatggaagactgaga
tatataaaagatcatgtggatgagaaagtaacttaccgtaccattaaagctgttattatt
aaattaaaaactaagataaacaagtttgagctataa
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