| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
ahb Anaeromicropila herbilytica
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ahb00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
bsdtb5_40760 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ahb03021]
bsdtb5_40760 (rpoC)
03400 DNA repair and recombination proteins [BR:ahb03400]
bsdtb5_40760 (rpoC)
Enzymes [BR:ahb01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
bsdtb5_40760 (rpoC)
Transcription machinery [BR:ahb03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
bsdtb5_40760 (rpoC)
DNA repair and recombination proteins [BR:ahb03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
bsdtb5_40760 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(4798870..4802559)
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| AA seq |
1229 aa
MPEITAEHVEQIAYDAIKIGLASPEKIREWSRGEVKKPETINYRTLKPEKDGLFCEKIFG
PSKDWECHCGKYKKIRYKGVVCDRCGVEVTKASVRRERMGHIELAAPVSHIWYFKGIPSR
MGLILDLSPRTLEKVLYFASYIVLDKGESDLQYKQVLNEKEFREAYDKYGNRFRVGMGAE
SIQELLRDIDLEKESKELKRDLKDSTGQKRARIIKRLEVVEAFRESGNKPEWMIMTVVPV
IPPDLRPMVQLDGGRFATSDMNDLYRRIINRNNRLKRLLELGAPDIIVRNEKRMLQEAVD
ALIDNGRRGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKIY
QCGLPKEMAIELFKPFVMKELVARGTAHNIKSAKKMVERLQSEVWDVLEEVIREHPVMLN
RAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAFNADFDGDQMAVHLPLSVEAQAECRFLL
LSPNNLLKPSDGGPVAVPSQDMVLGIYYLTQERPGDLGEGHAFKSINEAILAYENAEVTL
HAKIKVRRTGINLNGEEETKMVESTLGRFIFNEILSQDLGFVDRSKPENFLKPEIDFHVG
KKGLKQILEKCINTHGATKTAETLDAIKSLGYKYSTRAAMTVSISDMTVPAKKKTILEEA
EKTVEVISKNFRRGLMTEEERYKAVIETWKEADDEITEALLTGLDKYNNIYMMADSGARG
SDKQIKQLAGMRGLMADTSGRTIELPIKSNFREGLDVLEYFISAHGARKGLSDTALRTAD
SGYLTRRLVDVSQDLIIREVDCQEGKEIPGMWIKAFTDGREVIESLEERITGRYSCESIF
DDNGELIVKANHMITPKRAARIVAKQELIDAGNNAKVKIRTILSCRSHIGVCAKCYGSNM
ATGEAVQVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEELFEARKPKG
LAIIAEFGGVVTIKDTKKKREVIVTNNETGEAKAYLIPYGSRIKVMDGDILEAGDELTEG
SVNPHDILKIKGVRAVQDYMIQEVQRVYRLQGVEINDKHIEVIVRQMLKKIRIENNGDSD
YLPGTLVDTLEYDDVNVELREKGLEEVDGKQVMLGITKASLATNSFLSAASFQETTKVLT
EAAIKGKVDPLIGLKENVIIGKLIPAGTGMKRYRSVKLDSDISEELMVSEDVEDDNSFDG
IGNEITDNYQADEDSFDDLDMLSISEDEE |
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| NT seq |
3690 nt +upstreamnt +downstreamnt
atgcctgaaataactgcagagcacgtagaacagatagcctatgatgcgattaagatcggg
cttgcttcacctgaaaagatcagagaatggtctaggggtgaggtcaagaagccagaaact
attaattatagaactctaaaacctgaaaaagatggccttttctgtgaaaaaatctttgga
ccaagcaaagattgggaatgtcattgtggtaaatataaaaaaattcgatataaaggtgtc
gtttgtgatagatgtggtgttgaagtaacaaaagctagtgttcgtagagaaagaatggga
cacattgagcttgctgcaccagtatctcatatttggtattttaaaggaattcctagtaga
atgggtctaattttagacctttctcctagaactcttgaaaaagtattatattttgcatca
tatatcgtattagataaaggtgaatctgatttacaatacaaacaagtattaaatgaaaaa
gaattcagagaagcttatgacaaatacggaaatcgtttccgtgttggtatgggtgcggaa
tctattcaagaactattaagagatatcgaccttgaaaaagaatcaaaagaattaaagaga
gatcttaaagattctactggtcaaaagagagcaagaatcattaagagacttgaagttgtt
gaagcgttccgtgagtctggtaacaaaccagagtggatgattatgactgtagttccagtt
atcccaccagatttaagaccaatggttcaattagacggtggacgttttgcaacaagtgat
atgaatgacttatatcgtagaattatcaaccgtaataatcgtctaaagagattattagag
cttggtgctccagatattattgttcgtaatgaaaaaagaatgttacaagaagcagtagat
gctcttattgataacggtagaagaggacgtccagttactggtcctggtaaccgtgcacta
aaatctctatctgatatgttaaaaggtaagcaaggacgtttccgtcagaacttacttggt
aaacgtgttgactattcaggacgttctgttatcgtagttggtccagaacttaagatctat
caatgtggtcttccaaaagaaatggctatcgaattattcaagcctttcgttatgaaagaa
ttagttgcaagaggaactgctcataatattaaatctgccaagaaaatggtagaaagactt
caatcagaagtatgggatgtattagaagaagtaattagagaacatccagttatgctaaac
cgtgcacctactcttcacagacttggtatccaagcatttgaacctatattagtagaaggt
aaagcaattaaattacatccacttgtatgtactgcgttcaatgccgatttcgatggtgac
cagatggcggtacatttaccactttccgtagaagcacaagcagaatgtagattcttatta
ctttcacctaataacttactaaaaccatctgatggtggtcctgttgctgttccttcacag
gatatggtacttggtatctattatttaacgcaagaaagacctggtgatttaggtgaaggc
catgcattcaagagtattaatgaagctattttggcatatgaaaatgcagaagttacgctt
catgctaagattaaggtacgtagaactggtattaacttaaacggtgaagaagaaacaaag
atggttgagtctacgttaggacgtttcatattcaatgaaatcttaagccaagacttggga
tttgtagatcgtagcaaacctgaaaacttcttaaaaccagaaatagatttccatgttggt
aaaaaaggattaaaacaaattcttgaaaaatgtatcaatacacatggtgcaacaaagaca
gctgaaactcttgatgcaatcaagtctctaggatataaatattcaactcgtgctgctatg
acagtttctatctctgatatgactgtaccagccaagaagaagacaattctagaagaagca
gaaaaaacagttgaagtaatctctaagaacttccgtcgtggtcttatgacagaagaagaa
agatacaaagctgttattgagacttggaaagaagccgatgatgaaattacagaagctcta
ctaactggtcttgataaatataataatatttacatgatggctgactctggtgcccgtggt
tctgataagcagattaaacagcttgcaggtatgcgtggtcttatggccgatacatcaggt
cgtactatcgaacttccaattaagtcaaacttccgtgaaggtcttgacgtactagaatac
tttatctcagcacatggagctagaaaaggtctttctgatactgcgcttcgtacagccgat
tcaggttacttgactcgtcgacttgttgacgtatctcaagatttaatcatccgtgaagtt
gactgtcaagaaggcaaagaaatacctggaatgtggattaaggcatttacagatggccgt
gaagtaattgaaagcttagaagaaagaattacaggaagatattcttgtgaatcaatcttt
gatgataacggtgagctaatcgttaaggcaaatcatatgattactccaaaacgtgcagca
agaatcgttgcaaaacaagaattgatagatgcaggtaataatgcaaaagttaagattcgt
actattctttcttgtagatcacacattggtgtatgtgctaaatgttatggttctaacatg
gcaactggtgaagctgttcaagttggtgaagcagtaggtattattgctgctcaatcaatc
ggtgagccaggtacacagcttacaatgcgtacgttccatacaggtggtgttgccggtgat
gatatcacacaaggtcttcctcgtgttgaagaactttttgaagcaagaaaaccaaaaggt
cttgcaattattgcagagtttggtggagttgtaacaatcaaagatacgaagaaaaaacgt
gaagttatcgtaacaaataatgaaacaggtgaagcaaaggcttacctaattccttatgga
tcacgtattaaagttatggatggagacattcttgaagccggtgatgaattaacagaaggt
agtgttaaccctcatgatatccttaagattaagggtgttcgtgcggtgcaagattacatg
attcaagaagttcaaagagtttaccgtctacaaggtgtagaaattaatgataaacatatc
gaagttatcgttagacaaatgcttaagaaaatcaggattgaaaataatggagattcagac
tacttaccaggtactttagttgatactttagaatatgatgatgtaaatgttgaattacgt
gaaaaaggtctagaagaagtagatggtaaacaagtaatgctaggtattacaaaagcatct
cttgctacaaattcattcctttcagcagcatctttccaagaaacaacaaaagttcttaca
gaagcagcaattaaaggtaaagtcgatccacttatcggtctgaaagaaaatgttatcatt
ggtaagctaattccagctggtacaggtatgaagagatatcgttctgtaaaactagatagt
gatattagtgaagaattaatggtatcagaagacgttgaagatgataatagctttgatgga
attggaaatgaaataacagacaattatcaagcagacgaagattcttttgacgacttagat
atgctttcaatatcagaagatgaggaataa |
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