Aristaeella hokkaidonensis: JYE49_02190
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Entry
JYE49_02190 CDS
T09243
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ahc
Aristaeella hokkaidonensis
Pathway
ahc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ahc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JYE49_02190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahc03021
]
JYE49_02190
03400 DNA repair and recombination proteins [BR:
ahc03400
]
JYE49_02190
Enzymes [BR:
ahc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JYE49_02190
Transcription machinery [BR:
ahc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JYE49_02190
DNA repair and recombination proteins [BR:
ahc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JYE49_02190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
HHH_5
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QUC68578
LinkDB
All DBs
Position
complement(479110..480054)
Genome browser
AA seq
314 aa
AA seq
DB search
MVEIEKARIDCVEVGQNGCYGRFVIEPLERGFGHTLGNSLRRVLLSSLPGVAVSSVHIEG
VQHEFSTIPGVKEDVTEIILNLKTMACKMFADGPKQLTIDVKGPCELTAGDIKTDDEVEI
ANPELHIATLNEDAHLQMQLTLDRGRGYVSADKNKTPSMPIGVIPIDSIFTPVKKVNYTV
EDTRVGQITDYDKLTLEIWTNGTLKPEEAISSAAKILNEHLNLFISLTDQVMPVSMVQPE
DDKKDKVLEMTIEELDLSVRAYNCLKRAGINSVAELVQKNQEDMMKVRNLGRKSLEEVEQ
KLSALGLGLRPNDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atcgtcgaaatcgaaaaagcccgtatcgactgcgtcgaagttggacagaacggctgctat
ggccgctttgtgatcgagccgcttgaacgcggattcggccacaccctgggcaactccctg
cgtcgcgtgcttctttcctccctccccggcgtggcagtctcttccgtgcacatcgaaggt
gtgcagcacgagttctccacgatcccgggagtcaaggaagatgtaacggaaatcatcctg
aatctgaagactatggcctgcaagatgtttgccgatggccccaagcagctcaccatcgat
gtgaagggcccctgcgaactgactgccggcgatatcaaaacggatgatgaggttgaaatc
gccaacccggaactccatatcgccacgctgaatgaggatgctcatctgcagatgcagctg
accctcgatcgcggccgcggatatgtgagcgccgacaagaacaagacccccagcatgcct
atcggcgtgatcccgatcgactccatcttcactcctgtgaagaaagtcaactacacggtc
gaagatacccgcgtaggtcagatcacggactatgacaagctgacccttgagatctggacc
aacggcacgctgaagcctgaagaggctatttccagcgccgccaagattctgaatgagcac
ctgaacctgttcatcagcctgaccgaccaggtcatgcccgtgagcatggtgcagcccgaa
gacgacaagaaggacaaggttctggagatgactatcgaagaactggatctttccgtccgt
gcttataactgcctgaagcgtgccggcatcaacagcgttgctgagctggtgcagaagaat
caggaagacatgatgaaggtccgcaatctgggccgtaagagcctggaagaagttgagcag
aagctcagcgctctgggtctgggccttcgccccaatgatgactaa
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