Aristaeella hokkaidonensis: JYE49_04180
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Entry
JYE49_04180 CDS
T09243
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ahc
Aristaeella hokkaidonensis
Pathway
ahc03420
Nucleotide excision repair
ahc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JYE49_04180
03430 Mismatch repair
JYE49_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahc03400
]
JYE49_04180
Enzymes [BR:
ahc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYE49_04180
DNA repair and recombination proteins [BR:
ahc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JYE49_04180
MMR (mismatch excision repair)
Other MMR factors
JYE49_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DUF3553
MSSS
DEAD
Motif
Other DBs
NCBI-ProteinID:
QUC67904
LinkDB
All DBs
Position
902989..905313
Genome browser
AA seq
774 aa
AA seq
DB search
MDLTTLNPEQRRAAETLDGPVLILAGAGSGKTRALTYRVANLIDHGVPAWSILALTFTNK
AAKEMKTRVQSLIGEEKAEEAWISTFHSTCARILRRDIEKIGYSRSFTIYDDDDQQRILK
DILKQQNIDDKFLPVREIRAKISDAKNKMLMPDEWFAKSLRDRRSSMIHDVMTEYEKRMK
SMNALDFDDLLLKTLVLLADHPPVLEVYRRRFRYVMVDEYQDTNRTQYELLRLLTAESRN
LCVVGDDDQSIYGWRGADIRNILEFENDYPDAVVIKLEQNYRSTGNILDAANQVIAHNEG
RKDKTLWTEHGDGDKIVSYCGQDERDEAAWIIQQIQELKKQGIQYGDVALLYRTNAQSRI
PEEVLMQAGIPYRVFGGQKFYERKEIKDILAYLRVVANPADDISLTRIINVPKRSIGDTT
VQALAEHAARQGLPLFAAMADLPDDMSSRARNSVTEFFRLMTMLCAMKETMELEAFVEML
IQMTGLEEQYRKEDTEESLNRIENIQEFRGSVHEFAMLGEQPTLEAYLENVALVTDLDRA
EDRSGYVTMMTLHSAKGLEFDNVFIPGMEEGIFPSARSLEEDNRLEEERRLMYVGITRAR
KRLYLSRASERMMYNQYSHNPPSRFLEEIPARLVREEYSAAAGYGYGRRIEKRPGRTENF
STWESEFPETETVKRIPLASLGKPKLKLNGQNLNSIPGVSRGFTGSAANAFAGSAMQKLF
SPGERVRHPKFGFGEVTEVSGNGAEARIRINFETAGERELSLAVAPIVKVGEKE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggatctgactacattaaacccggaacaacgaagggctgccgagacgctggatggccct
gtactgatcctggccggagcaggaagcgggaaaacccgggcactgacttaccgggtcgca
aacctgattgaccacggagtgccggcctggtcgattctggcactgacatttaccaacaag
gccgcaaaagaaatgaagacgagggtgcagagcctgattggtgaagagaaggctgaagaa
gcctggataagcacctttcactccacctgtgcccggattcttcgcagagatattgaaaag
atcggatacagccggtcttttacgatttatgatgacgatgatcagcagaggatcctgaag
gatatcctgaaacagcagaatatagacgataagttcctgccggtaagggaaatacgggct
aaaatcagcgacgcaaaaaacaaaatgctcatgccggatgaatggttcgcaaagtcactg
cgcgacagaagatcctccatgatccatgatgtcatgacggaatatgaaaagcgcatgaaa
tcaatgaatgcgcttgattttgatgacctgctgctgaaaacccttgtattgctggccgac
catccgcctgtcctggaggtataccggagacgattcaggtatgtcatggtcgatgagtat
caggatacaaaccgcacacaatatgagctgctgagactgctgacagcggaaagccggaat
ctatgcgtggtcggggatgatgaccagagcatatacggatggcgcggcgcggatatacgg
aatatcctcgaatttgaaaatgattacccggatgcagtcgtcatcaaactggagcagaat
taccgctccacaggcaatatcctggacgctgccaatcaggttattgcccataatgaaggc
cggaaggacaaaaccctgtggacggaacacggcgacggagacaagattgtcagttactgc
ggacaggatgaaagagacgaagcggcctggattatccagcagattcaggaactgaaaaaa
cagggaatacaatatggggacgtagcgctgctttaccgtacgaacgcacagagccgtatt
cctgaagaagtacttatgcaggccgggattccttacagggttttcggcgggcagaaattc
tacgaacgcaaggaaatcaaggatatcctggcatatctgagggtggttgccaatccggcg
gacgatatttcgctgacccgtattatcaatgtacccaaaagatcgatcggggatacaaca
gttcaggcgctggcagaacatgcagcaagacagggcctgccgctttttgccgcgatggcg
gatcttcctgatgatatgagcagccgcgccagaaacagcgtgacagagtttttccgcctg
atgacaatgctgtgcgccatgaaagaaaccatggagcttgaagcttttgtggagatgctg
atccagatgacgggcctggaggaacagtaccggaaagaagacactgaggaatcactgaac
agaattgaaaacatacaggaattccgtggctcggtgcatgaattcgcgatgctgggtgaa
cagccgaccctggaggcataccttgagaatgtggcgcttgtgacagatcttgaccgggcg
gaagaccggagcggatatgtgacaatgatgacccttcactcagccaaaggtctggaattt
gacaatgttttcattcccggtatggaagagggcattttcccgtcggccagaagtctggag
gaggacaacaggctggaagaggaaaggcgactgatgtatgtcggtataacaagggcaaga
aaacggctgtatctgtcacgcgcatctgaacggatgatgtacaaccagtacagtcataat
ccgccgagccgattcctggaggaaatacctgccagactggtcagggaagagtattccgca
gccgcaggatacggatatggacgaaggatcgaaaagagaccgggacgtacagaaaacttc
agcacatgggagagcgagttcccggaaactgaaacggtcaaacgtataccgctggcttca
cttggcaagccgaagctgaagctgaacggacagaacctgaacagtattcctggtgtgtcc
aggggttttacaggcagcgctgcaaacgcatttgcagggtctgccatgcagaaactcttc
agtccgggcgaaagagtcaggcatccgaagtttggtttcggggaagtgaccgaagtttcc
ggaaacggcgcagaagcgagaatcaggatcaattttgagacggccggtgagcgtgaactc
tcactggcggtggctccgatcgtaaaagtgggggaaaaggaatga
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