Aristaeella hokkaidonensis: JYE49_04290
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Entry
JYE49_04290 CDS
T09243
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ahc
Aristaeella hokkaidonensis
Pathway
ahc03030
DNA replication
ahc03430
Mismatch repair
ahc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYE49_04290 (dnaX)
03430 Mismatch repair
JYE49_04290 (dnaX)
03440 Homologous recombination
JYE49_04290 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahc03032
]
JYE49_04290 (dnaX)
03400 DNA repair and recombination proteins [BR:
ahc03400
]
JYE49_04290 (dnaX)
Enzymes [BR:
ahc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JYE49_04290 (dnaX)
DNA replication proteins [BR:
ahc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JYE49_04290 (dnaX)
DNA repair and recombination proteins [BR:
ahc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JYE49_04290 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_5
AAA_22
AAA_30
TIP49
AAA_19
RuvB_N
AAA_assoc_2
AAA_7
AAA_2
ResIII
AAA_24
AAA_18
DUF815
DEAD
Rad17
DUF6395
CRM1_repeat_2
DNA_pol3_delta_C
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QUC67926
LinkDB
All DBs
Position
930319..931944
Genome browser
AA seq
541 aa
AA seq
DB search
MAYRALYREWRPKDFSHVVGQAPIIGTLRNQVVTNRIAHAYLFCGSRGTGKTSTAKILAK
AINCLQPENGDPCGKCENCLRADNEETLDVIEIDAASNNGVDEMRELRDTVKYPPQYGKY
KVYIIDEVHMLSTSAFNALLKTLEEPPAHIVFILATTEPQKLPETILSRCQRFDFGRIPS
TEIAGRLKEAAEGSGAQVSDGALMMIARAADGGMRDALSILDMCLGYSDQVDEELVRNIL
GTSDTSFLFEFSKALSEQDASKVYLMIDRLMRDGKDPAVFAKDVCRHIRALLIAKTSPED
VSMIMDISGDEAAEYVRQSESMTVSRLMKILDLFMALETEMRYASTPRMALENASIKSCL
RIEETDSQALNDRIIELEKRIDGLMRNPAAAAAAQIPVEETKTTRIQQPREERKVPQAAG
RENSGNHAAVWKELMNTIRGKDMTAWSFLSQGRMIGCKNGRYLWQADRKEAEVQFITVLN
MPERNKTICECLQQITGQACSFSAVPQGKSSETADNSGDDEYLESIYETFGKEPVNIVDE
I
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcgtgcactgtaccgtgagtggagacccaaggatttctcccatgttgtcgga
caggctccgatcatcggaacgctgagaaatcaggtcgtcacaaaccgaattgcacatgca
tacctgttctgtggatcccgtggaacagggaaaacctccacagccaagattctggcaaaa
gcgattaactgtttacagcctgaaaacggtgatccatgcggaaagtgtgagaactgtctg
cgggcagacaatgaagagaccctggatgttattgaaatcgacgcagccagcaataacggc
gtggacgagatgcgggaactgagggatacggtaaagtatccaccccagtacggtaaatat
aaagtatatattatcgatgaagtgcatatgctgtccacatctgcattcaatgcactgctg
aaaacattggaggaacctcctgcccatattgttttcatcctggcaacaacagaaccgcag
aagctgccggaaaccatcctgagcagatgtcagcgctttgactttggacggattcccagt
acggaaatagccggaagactgaaggaagcggcagaaggcagcggcgcgcaggtatctgac
ggcgctcttatgatgattgcaagggctgccgacggcggcatgagggacgcgctcagcatc
ctggacatgtgccttggatacagtgatcaggttgatgaagaactcgtcagaaacatactt
ggaacgagcgatacatcctttttgttcgaattcagcaaagcactttctgaacaggatgct
tcgaaggtttatctcatgattgacaggctcatgcgtgacggcaaagatccggccgttttc
gcaaaagatgtctgcagacatatcagggccctgctgattgccaaaaccagtcctgaagat
gtatccatgattatggatatttccggggatgaagctgcggaatatgtccggcaaagcgaa
tcaatgacagtgtcaaggctgatgaaaattctggatctgttcatggcgcttgaaacggaa
atgagatatgcttctacaccgagaatggctttggaaaacgccagtattaaaagctgtctg
agaatcgaagaaacggattcacaggccctgaatgacaggattattgaacttgaaaaacgt
atagacggattgatgcggaatcctgcggcagcagctgctgcacaaattcccgtggaggaa
acaaaaaccaccaggatacagcagcccagggaagaaagaaaggtgcctcaggctgccggg
agagaaaacagcggaaatcatgctgcggtatggaaagaactgatgaatacaatccgcgga
aaagatatgactgcctggagctttctttcccagggccgtatgatcggctgtaaaaacgga
aggtatctctggcaggcggacaggaaagaagcagaggttcagtttattactgttctcaat
atgccggaaaggaacaaaaccatctgtgaatgtcttcagcagataaccggacaggcatgc
tcattttctgctgtgcctcagggcaaatcatccgaaacggctgataacagcggagatgat
gaatatcttgagtcgatttatgaaactttcggaaaagaacctgtgaatatagtggatgag
atttaa
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