Aristaeella hokkaidonensis: JYE49_07710
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Entry
JYE49_07710 CDS
T09243
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ahc
Aristaeella hokkaidonensis
Brite
KEGG Orthology (KO) [BR:
ahc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahc03400
]
JYE49_07710
Enzymes [BR:
ahc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYE49_07710
DNA repair and recombination proteins [BR:
ahc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JYE49_07710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Baseplate_J
IATP
Motif
Other DBs
NCBI-ProteinID:
QUC65774
LinkDB
All DBs
Position
complement(1725209..1728520)
Genome browser
AA seq
1103 aa
AA seq
DB search
MSRVKIIGDRNGRVWPLVLRDAEESRKAGRRLILYVPEQYTLQAERDIITGLKLPGLLDI
QVISPRKLKQQVKEQTGTGTRRPLNEMGRAMAVHRVMTEQEENLSYYRNMTELSGAVSRV
SGALDELRESDITPEELDEYAAGTGTGAERAKLNDLKILWDGYETLISEQFDEEKAIWTD
AVSRLENSGLWNGADVAVYGFDAIRPDLRELIAHLCGKVNSLSVYLIMDEKQAPDGRIFT
QQHESTDQLIKALEEVRTLSDEVYPHSVREGCAPALQFLDRNLFALNPETWTGETEGVLK
LYAGSSPWDEAETVASTLRGWHEEGIPWNQMAIALPPGAGSEGILRANLKISGIPFVWQQ
KDKAVNHPVCRMLLSALSILSDGYRTDKVITVARSGFCTLTEAEGLCLEDYARAHGIEGR
RWQRPFTNGEDAEETEALRQRLLEPVEELRTNLKEARNAAESAEALVGFLEAQNVWNRLQ
EEEEMLLQHEMYREAIINRQIWKLLMDLLDQLGTLLGVRRAAIRDLRYMLESALNPVSLA
ALPEQEDGVIIGETGHLLAGDIRALILPQAQDGMLTAPESGWLTDTERKRMEEATGKTIG
ISREAGCLIRKYDFYRTLTLPREKLMISWSLRSEEGGALQPDGLIAQIRELYPNIHEEGG
MLGQENRKDPATPREALEGVGNWLTELKDGMIPEMPQVWRTALVQLLHNGTYGKAAHRLL
EEMLPQKEEQKLEKDTARKLFMTDRLSISRLEQFASCPYRHFIDYGLRPVKQEEFTYESN
DAGTFFHEALDRYMKQAGTQKDWPYFTAEQVDNVMDTILTELTEEWKDTPLREDAMGEWT
GEGYLRRVRRAAQVLTRFAANSEFRTIATEQPFGENEGLPPVIITLADGSKTAIRGQIDR
IDTYENGEGVWLRVVDNKSRGKKPDPAKMEDGEQLQLMIYLKAAADSMPGTRPAGAMFFP
IEDKEVSTDEDNPEKIENDRISEVRMKGLVTAEEDLIRAMDRDVHPFSVDKVFNKDGTIS
KSASWAVEEKTLSGLMDAAVEKAGELCGRMRDGDIAAMPGEDSLGPVCRYCDYKAICRNG
GRETRKLNTGITYQDIAGKNTLR
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggtgaaaatcatcggagacaggaatgggcgggtctggccgctggtactccgt
gacgcggaggaaagcagaaaagccggacgaaggctgattctgtatgtgcccgagcagtat
accctgcaggcggagcgggacatcattaccggcctgaagctgccgggactgctggacatc
caggtgatcagcccgcggaaactgaaacagcaggttaaagagcagacggggacgggaaca
aggcgcccgctgaatgaaatgggccgggcaatggcggttcaccgggtgatgacggaacag
gaggaaaacctgtcctactaccggaacatgacggagttgtccggcgcggtgtcccgcgtc
agcggggcgctggatgaactgcgggaaagcgatataacgccggaggaactggatgagtac
gccgccggcacgggaacaggcgcggaacgcgccaagctgaacgacctgaaaatcctctgg
gatggatatgagacgctgatctcggaacagtttgatgaagaaaaagctatctggaccgat
gctgtaagccggctggaaaacagcggattgtggaacggtgcagacgtagcggtttacggt
tttgacgcgatccggccggacctgagggaactgattgcccacctttgcggcaaggtaaac
agcctgtcggtttatctgatcatggatgaaaaacaggctccggacggacggatctttaca
cagcagcatgaaagcacagaccagctgatcaaggccctcgaggaagtcaggacgctttca
gatgaagtctatccgcacagcgtacgggaaggctgtgccccggcactgcagttcctggac
cggaatctgtttgcgttgaatccggaaacctggacgggggaaacggaaggcgtgctgaaa
ctatatgccggcagttctccgtgggatgaggcggaaaccgttgcgtccacgctgcgggga
tggcatgaggaaggcattccgtggaaccagatggcaattgcccttccgccgggagccgga
tctgaaggaatcctgagggcaaatctgaagatcagcggtattccctttgtgtggcagcaa
aaggacaaagcggtgaatcatcccgtatgccgtatgctgctcagtgcactgtccatcctg
agtgacggctatcgcacggacaaggtgatcacagtggcgcggagcggcttctgcacactg
acggaagcagaaggcctgtgcctggaggactatgcccgggcacacggcatagagggaaga
agatggcagcgcccctttacaaacggggaggacgcggaggaaacggaagcgctccggcag
cggctgctggagccggtggaggaactgcggacgaacctgaaggaagccaggaacgcggcg
gagtccgcggaggcgctggttggattcctggaggcgcaaaacgtatggaacaggctgcag
gaagaggaagaaatgctcctgcaacatgaaatgtacagggaagcgattatcaacaggcag
atctggaaactgctgatggatctgctggatcagcttggtacgcttctgggcgtgcggcgc
gcggcaatcagggatctgcggtatatgctggaaagcgcactgaatccggtgtcgcttgct
gcgctgccggagcaggaagacggcgtcataatcggtgagacagggcatctgctggcaggc
gatatccgggcactgattcttccgcaggcgcaggatggcatgcttacagcaccggaaagc
ggctggctgacggataccgaacggaaaaggatggaggaagccaccgggaaaaccatcggc
atcagccgggaggcaggctgcctgatccggaaatatgacttctatcgtaccctgacgttg
ccgcgggagaagctgatgatcagctggagcctgcgttcggaagaaggaggcgcactgcag
ccggacggactgatcgcccagatcagggaactgtatccgaatatccatgaagagggcggc
atgctgggccaggagaaccggaaggatccggcaacgcctcgggaagcactggaaggtgtg
ggaaactggctgacagagttgaaggacggtatgataccggaaatgcctcaggtctggaga
acggccctggttcagctgctgcacaacggtacatacggaaaggcggcgcaccggctcctg
gaggaaatgctgccgcagaaagaagagcagaagctggaaaaggatacagccaggaaactg
tttatgacagaccggctgtccatcagccggctggagcagtttgcatcctgcccgtacagg
cactttattgattatggcctgcggccggtgaaacaggaagaatttacctatgagagcaac
gacgcggggactttcttccatgaagcgctggaccggtatatgaagcaggccggcacgcag
aaagactggccgtattttacggcggagcaggtggacaacgtcatggataccatcctgacg
gagctgacagaggagtggaaggatacaccgctgcgggaagacgcgatgggagaatggacg
ggcgagggatacctgcgccgcgtccgccgggctgcgcaggtgctgacccggtttgccgca
aacagcgaattccggacgatagcaacggagcagcccttcggtgaaaatgaaggccttccg
ccggtgatcatcacactcgcggacggaagcaagacggcgattcggggacagattgaccgg
attgacacctatgaaaacggcgaaggcgtctggctgcgggtggtagacaacaagagcagg
ggaaagaaaccggatcccgctaaaatggaggacggagagcagctgcagctgatgatttac
ctgaaagccgcggctgacagcatgccgggcacccggccggccggcgccatgttctttccc
attgaggataaagaagtgtccacggatgaggataatccggaaaagattgagaacgaccgg
atcagcgaggttcggatgaagggcctggtcacggctgaggaagacctgatccgggccatg
gaccgggacgtgcatccgttctccgtggacaaggtgttcaataaggacggaaccatcagc
aaatccgcatcctgggccgtggaagaaaagacgctcagcggcctgatggacgcggcggtt
gaaaaagcaggagaactctgcggccgtatgcgggacggtgatattgccgccatgccgggc
gaggattccctcggaccggtatgccgatactgtgattacaaggcaatctgccgcaacggc
ggcagggaaacacgcaagctgaacaccgggataacttatcaggatatcgccgggaaaaac
acgttgcgctaa
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