Aristaeella hokkaidonensis: JYE49_11590
Help
Entry
JYE49_11590 CDS
T09243
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ahc
Aristaeella hokkaidonensis
Brite
KEGG Orthology (KO) [BR:
ahc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ahc03036
]
JYE49_11590 (smc)
Chromosome and associated proteins [BR:
ahc03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JYE49_11590 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
MADF_DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QUC66498
LinkDB
All DBs
Position
complement(2544102..2547671)
Genome browser
AA seq
1189 aa
AA seq
DB search
MRLKKLELYGFKSFPERTEIVFKEGITAIVGPNGSGKSNIGDAVRWVLGEQSAKILRGAS
MQDVIFGGTQRRKPLSYCEVSLVFDNEDKSLPLDYAEIQVTRRVYRSGESEYFLNRSSCR
LKDVVDLFRDTGIGKEGYSIIGQGRIDEILSRKGEDRRQVFEEAAGIVKFRARKEEADKK
LARTQENISRVDDLLDELKHRLGPLEEDAKNARVYLDLSARLKVLDLNLFLVRSDKMEAK
LRESDHDLQNMQAVLTQNEENLKARTEERDIRQAEIQDLDEKIASAHNALMEGMETVHRA
ENASREVEERRNRRQEDRQRIGEELKDAEERIAELDAMASESSGGSETRSASLEKLTARL
EAAKAAEEQARAEEAEKEKILEEHKNEMLEAVNRRAAALSDQTRLTTMLNAMETRLQEIT
VSCEEMRKEETDLAAAVTDAHGRLEKETAEQDRLSASLQEARTGLETADAEVISARAAYD
TKLAEMREMEARQKILEDLSREMEGYSHAVRRVMHRARDREDNRIRGPISQLISVPEKYE
TAMDMVLGNTQQHIVTEDEETAKELIEFLRERKMGRATFLPMTTVRPRLLTPQEQEVLSM
PGCLGVASDLVSCDEDYRGIVENLLGRTVVAEDLASGIPIMRRGGHAFRLVTLKGDVMHS
GGSMTGGSVSSNNVNLFTRERELKELTGKLSAGQDELEALLKQMQDGQKRKDELKSRSAD
ALEELHQQEIAVARETERVQNAEAEASTHAMRLHESEAAREQLMESMMQIREQLSMAADS
TEQTDKTRDEMEAQAAQLQQALTEARKKTEERAEETLRLTLETNDLRHELETLQRDRARY
EQDRKRMTAEQERRRKQLAEMEAAEAGDLEAAAAAEKELEQGRLEQARRERISHALEEDR
AGKQEMLKEILSDIEGLHQSRQRDTDRAHRLELSRARTEGDLKALRDRIWNTYEITYAGA
EEFRITEGFSLTEADREAAQLSAEIRALGPVNVRAVEEYADTKARADEIIAQREDLEKAE
QDLKDLIARLLAGMKETFVEQFTLLQGYFSETFVRLFGGGHAELILMDPSDPLNCGIEIN
AQPPGKKLQLLSLLSGGERTLTAIAILFATLKLKPTPFCILDEIEAALDDANIGYFADYL
AEYSASTQFVVITHRKGTMERANGLYGVAMEEQGVSRMVSVSLQDYREA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttaaagaagctggagctctacggattcaagtcctttccggagcggactgagatt
gtcttcaaggaaggcatcaccgcgatcgtgggacccaacggatccggaaaaagcaatata
ggcgacgcagtgcgctgggtgctcggtgagcaaagcgcgaaaatcctgcgcggcgccagc
atgcaggacgtgattttcggcggcacacagcgcagaaagcccctcagttactgtgaagtt
tcccttgtctttgacaatgaagataaaagccttcccctggactatgcggagattcaggtg
acccgccgggtttaccgcagcggggaaagcgaatatttcctgaaccgctcttcctgccgc
ctgaaggatgtcgtggatctgttccgcgataccggtatcggcaaggagggctattccatt
atcggccagggccgcattgatgaaatcctgtcccgcaagggagaggaccgccgccaggtc
tttgaggaggccgccggtatcgtcaagttccgtgcccgcaaggaagaggcggacaagaag
ctggcccgtacccaggaaaacatttcccgggtggatgacctgctggatgaactgaagcac
cgcctcggcccgctggaagaggacgcgaagaacgcccgggtttacctggacctgtccgcc
cggctgaaggtgctggacctgaacctgttcctggtccgctcggataagatggaagcgaaa
ctccgggagtcggatcatgacctgcagaacatgcaggctgttctgacgcagaacgaggag
aacctgaaagccaggacggaggaacgggatatccgccaggcggagatccaggacctggat
gaaaagatcgcgtccgcccataacgccctgatggagggcatggaaacggttcaccgggcg
gagaacgcctcccgtgaagtggaggagcgccggaaccgccgccaggaggaccgtcagcgc
atcggggaggaactgaaggacgcggaggagcggatcgcggagctggacgccatggcgtcc
gaatcctccggcggcagcgaaacccgcagcgcctcgctggagaagctgactgcccgactg
gaagccgcaaaggcggcggaggagcaggcccgggcggaggaagctgaaaaagagaaaatc
ctggaagaacataagaatgagatgctggaggcggtgaaccgccgtgccgcggccctgagc
gatcagacccgtctgactacgatgctcaacgccatggagacccgcctgcaggaaatcaca
gtttcctgtgaggagatgcggaaagaggaaacggatctcgccgctgctgtgacagatgcc
cacgggcgcctggaaaaggaaaccgcggagcaggatcgtctgtccgcttccctgcaggaa
gcccgcaccggactggaaaccgcggacgcggaagtgatcagcgcccgggcggcttatgat
acaaagctggcggagatgcgggaaatggaagctcgccagaagatcctggaggatctttcc
cgggagatggaaggttattcccatgccgtgcgccgcgtgatgcaccgggcgcgggaccgg
gaggacaaccggatccggggtcccatcagccagctgatttccgtcccggaaaaatatgaa
actgccatggatatggtgctcggcaacacccagcagcatatcgttaccgaggatgaggaa
accgccaaggaactcatcgaattcctgcgtgaaagaaaaatgggccgggccaccttcctg
cccatgacgacggtcaggccgcggctgctgaccccgcaggagcaggaagtcctgtccatg
cccgggtgcctgggcgtggcttccgacctggtatcctgtgacgaggattaccgcgggatt
gtggagaacctcctgggccgtacggtggtcgcggaggatcttgcttccggtattcccatc
atgcgcaggggcggacatgccttccggctggtgacactcaagggagacgttatgcactcc
ggcggttccatgaccggcggttccgtttcttccaacaatgtaaacctcttcacccgggaa
cgggaactgaaggaactgacagggaagctttctgccggacaggatgagcttgaggcactg
ctgaagcagatgcaggacggccagaagcggaaggatgagctcaaatcccgttccgctgac
gcgctggaagaactgcaccagcaggaaatcgccgttgcccgggaaaccgagcgcgtgcag
aacgcggaagcggaagcgtccacccatgccatgcggcttcatgaatccgaggcagcccgg
gagcagctcatggagtccatgatgcagatccgggagcagctgtccatggccgcggacagc
acggagcagacggacaagacccgtgatgagatggaagcgcaggcggcacagctgcagcag
gcgctgacagaagcccggaaaaagacagaggagcgggcggaggaaaccctgcgcctgacc
ctggaaacgaatgacctgaggcacgagctggaaaccctgcagcgggatcgtgcccgttat
gagcaggaccggaagcggatgaccgcggagcaggaacgccgccggaaacagctggcggaa
atggaagcggcggaagccggagatctggaagccgcggccgcagcggaaaaggaactggag
cagggccgtctggagcaggcgcgccgggagcggatctcccatgcactggaagaggaccgg
gccggaaaacaggagatgctgaaggaaatcctttcagatatagaaggcctgcatcagtcc
cgccagcgggatacggaccgggcgcaccggctggaactcagccgtgcccgtacggaaggc
gacctgaaggcgctgcgtgaccggatctggaacacatatgaaatcacctatgccggagcg
gaagagttccggatcaccgaaggcttcagcctgaccgaggcggaccgcgaagcggcccag
ctgtccgcggaaatccgcgctctcggcccggtcaacgtccgggcggtggaggaatacgcg
gataccaaagcccgtgcggatgaaatcatcgcgcagcgggaggacctggagaaggcggaa
caggatttgaaggacctgattgcccgcctgctggccggtatgaaggaaacctttgtggag
cagttcacgctgctgcagggctatttctcggaaacctttgtccgtcttttcggcggcggc
catgccgagctgatcctgatggatccctcggatcccctgaactgcggcattgaaatcaat
gcccagcctccgggcaaaaagctgcagctgctgtcgctgctttccggcggcgagcggacc
ctgacagctatcgcaatcctgtttgccaccctgaagctgaaaccgacgcccttctgtatc
ctcgacgaaatcgaggccgcgctggacgacgcgaatatcggctatttcgctgattacctg
gcggagtattccgcttccacccagtttgtggtcattacccaccggaagggaaccatggaa
cgggcaaacggcctgtatggtgtggccatggaagagcagggagtcagcagaatggtttcc
gtttccctgcaggattaccgggaagcataa
DBGET
integrated database retrieval system
