Aristaeella hokkaidonensis: JYE49_11945
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Entry
JYE49_11945 CDS
T09243
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ahc
Aristaeella hokkaidonensis
Pathway
ahc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JYE49_11945 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahc03400
]
JYE49_11945 (uvrA)
DNA repair and recombination proteins [BR:
ahc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JYE49_11945 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JYE49_11945 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
nSTAND1
AAA_16
RsgA_GTPase
AAA_23
DnaJ_CXXCXGXG
AAA_25
cobW
NACHT
Nop10p
Motif
Other DBs
NCBI-ProteinID:
QUC66560
LinkDB
All DBs
Position
complement(2620520..2623342)
Genome browser
AA seq
940 aa
AA seq
DB search
MNEFLKIRGAREHNLKNISLQIPRDKLTVITGLSGSGKSSLAFDTIYAEGQRRYVESLTS
YARQFLGQMDKPDVDAIEGLSPAISIDQKTTGRNPRSTVGTVTEVHDYLRLLWARIGVPH
CPVCGREIRKQSVDEIVDAVCAAPEGTRMQVLSPLVRGRKGEHKDLLSSARKSGYVRVRI
DGEMYDLEDTPELDKKKKHTIEIVVDRLIRRDTDEFRHRLAEDVETAAVRGAGLVIIDCM
DKGETLYSMNYACPDCGVSIEELEPRMFSFNSPYGACPGCSGLGIRMKISREAIFPDERV
TLREGAMNLMGFNAAEDNGIAAQYFGAMGKKYGFTLDTPLEEINGEGMDALLYGTGDEKI
SITYEGARGMREYTTSFEGIIPTLERRYKETTSDAMKQAYEEYMAEETCPECGGQRLKAE
ARAVTVGGKSLPEVSDMSIQQAREFFANLELSGNDRIIAAQILKEIDARLGFLCDVGLEY
LTLSRGAGTLSGGEAQRIRLATQIGSALMGVMYILDEPSIGLHQRDNAKLIATLRRMRDL
GNTVIVVEHDEETMLAADWIVDVGPGAGLHGGYIVAEGTADDIRACPESLTGQYLSGKKV
IPVPAKRRKPTGWLTVRGAEEHNLKHIDVRIPLGVLTCVTGVSGSGKSSLVNEIIYKNLA
RKLNRAKTRPGRFESMEGLELLDKIIMIDQSPIGRTPRSNPATYTGLFDLIRKLFALSPE
AKARGYKENRFSFNVKGGRCEACQGDGMKRIEMHFLPDLYVPCDVCHGRRYNRETLEVTW
QGKNISEVLDMTVEEALGFFENHPQITRKLETLYDVGLGYMKLGQASTTLSGGEAQRVKL
ATELSRRATGKTIYLLDEPTTGLHMADVDRLIQVLQRLTDAGNSVLVIEHNLDVIKVSDH
IIDLGPEGGSGGGTVVAEGTPEQVAAVKGSYTGEYLKKVL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatttctgaagatcaggggtgcccgtgagcacaacctgaagaacatttctctt
caaataccgagagataagctgaccgtgattacgggactgagcggcagcggcaaaagttcg
ctggccttcgacacgatttacgcggaaggccagcgacgctatgtggaaagcctgaccagc
tatgcccggcagttcctgggccagatggacaaaccggacgtggacgccattgaaggcctg
agcccggcgatttccattgaccagaaaacaacggggcggaatccccgttccacggtgggc
accgtgacggaggtgcacgactatctgcgcctgctctgggcgcggatcggtgtgccgcac
tgcccggtctgcggccgggagatccggaagcagtctgtggatgaaatcgtggacgcggtc
tgcgccgcgccggagggaacccggatgcaggtgctcagcccgctggtccgcggacgcaag
ggggagcataaggatctgctttcttccgcccgcaagagcggttatgtccgtgtgcggatt
gacggggaaatgtatgacctggaagacactccggaactggataaaaagaaaaagcatacc
attgagattgtggtggaccgcctgatccgccgggatacggatgagttccgtcaccgcctg
gcggaggatgtggaaacagccgctgtgcggggcgccggcctggtgatcatcgactgcatg
gacaagggcgaaacgctgtacagcatgaattatgcctgcccggactgcggcgtgtccatt
gaggaactggaaccccggatgttctccttcaacagcccgtacggggcctgcccgggctgc
agcggcctggggatccggatgaagatcagccgggaggcgattttcccggatgagcgggtt
accctgcgggaaggcgccatgaacctgatgggcttcaatgccgcggaggataacggcatt
gcggcccagtacttcggtgccatggggaagaagtacggctttacactggatacgcccctg
gaagaaatcaacggcgagggcatggacgccctgctctacggcaccggggacgaaaagatc
agcattacctatgaaggcgcccgcggcatgcgggaatataccaccagctttgaggggatc
atccctacgctggagcggcgctacaaggaaaccacctcagacgccatgaagcaggcctat
gaggaatacatggcggaggaaacctgtccggaatgcggcgggcagcgcctgaaggcggaa
gcccgggcggtaaccgtgggaggaaagagcctgccggaagtcagcgatatgagcatccag
caggccagggagttctttgcgaacctggagctgagcggaaatgaccggattatcgcggcg
cagatcctgaaggagattgacgcccggctgggcttcctgtgcgacgtgggcctggagtac
ctgaccctcagccgcggcgcgggaacgctctccggcggcgaggcacagcgtatccgcctg
gccacccagatcggcagcgccctgatgggggttatgtatatcctggacgagcccagcatc
ggcctgcaccagcgggataacgcgaagctgatcgcgacgcttcgccggatgcgggacctg
ggcaacaccgtgatcgtggttgagcatgatgaagaaaccatgctggccgcggactggatt
gtggacgtgggtcccggtgcggggctgcacggcggttatattgtggcggaaggcacggcg
gatgatatccgcgcctgcccggaaagcctgaccggccagtacctgagcgggaaaaaggtg
attccggtaccggcgaaacggcggaagcccacgggctggctgacggtccggggtgcggaa
gaacacaacctgaagcatattgacgtgcggattccgctgggcgtgctcacctgtgtgacg
ggtgtcagcggcagcggcaagagcagtctcgtcaatgagattatctataagaaccttgcc
cggaagctgaaccgggccaagacgcgtcccggccgcttcgaaagcatggagggcctggaa
ctgctggacaagatcatcatgatcgaccaaagccccatcggccggacgccccggagcaat
ccggccacctataccggcctgtttgacctgatccgcaagctgtttgccctcagcccggag
gccaaggccaggggttataaggaaaaccgcttctccttcaacgtcaagggcggccgctgc
gaggcctgccagggagacggtatgaagcggattgagatgcacttcctgccagatctgtat
gtgccctgtgacgtctgccacggccgccggtataaccgggagaccctggaggtcacctgg
cagggaaagaatatcagcgaagtgctggatatgacggtggaggaagctcttggcttcttc
gaaaaccatccccagatcacccgcaagctggaaaccctgtatgatgtgggccttggctac
atgaagctgggccaggcctccaccacgctctccggcggtgaagctcagcgcgtgaagctg
gcgacagaattgagccgcagggcgaccggtaaaaccatttacctgctggacgagccgacc
accggcctccatatggcggacgtggaccggctgatccaggtgctccagcggctgacggat
gccgggaactcggtgctggtcatcgagcataacctggacgtgatcaaggtatcggatcat
atcatcgacctgggtccggaaggcggcagcggcggcggtaccgtcgtggctgaaggcact
ccggaacaggtggctgcggtaaagggatcctataccggggaatacctgaaaaaggtgctt
tga
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