Aristaeella hokkaidonensis: JYE49_13230
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Entry
JYE49_13230 CDS
T09243
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ahc
Aristaeella hokkaidonensis
Pathway
ahc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JYE49_13230 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahc03400
]
JYE49_13230 (ruvB)
Enzymes [BR:
ahc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYE49_13230 (ruvB)
DNA repair and recombination proteins [BR:
ahc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JYE49_13230 (ruvB)
RecFOR pathway proteins
JYE49_13230 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
DUF815
RNA_helicase
AAA_22
IstB_IS21
nSTAND3
AAA_3
NB-ARC
Resolvase
MCM
AAA_25
AAA_14
AAA_24
TsaE
NACHT
NPHP3_N
AAA_18
Sigma54_activ_2
AAA_11
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QUC68689
LinkDB
All DBs
Position
complement(2951444..2952472)
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AA seq
342 aa
AA seq
DB search
MDDRLMTGSYMAEDSSVEQTLRPHTLKDYVGQQAVKSSLDIYIQAALSRHDALDHMLLYG
PPGLGKTTLACIVAAEMGQNIRVTSGPAIERPGDLASILSNLNAGDVLFIDEIHRLSRQV
EEVLYPAMEDYAIDIMIGKGPTARSIRVDLPKFTLVGATTRAGQLSAPLRDRFGMLFRLE
MYTPEELRQIVERSAGILGVDADPEGLLEIARRSRGTPRIANRMLKRVRDYAEVKAGGHI
SRDIAREALALLDVDELGLDKVDRNILSCMMDKFAGGPVGLDTLAATTGEDAVTIEDVYE
PYLMQLGFLMRTPRGRVCTPAAWNHMKKNMPASAEAQIRMEI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagattgatgaccgggtcctatatggcggaggacagctctgtagagcagacc
ctccgtccccatacactgaaggactatgttggccagcaggcagttaagagcagtctggat
atctatatccaggcagccctctcccgtcatgacgcgctggaccatatgttgctttacggc
cctcccggcctgggcaaaaccaccctcgcctgcatcgttgcggcagaaatgggacagaac
atccgtgtcaccagcggcccggccattgagcggcccggtgacctggcttccatcctcagc
aacctgaacgcaggcgacgtgctcttcattgatgaaatccaccgcctctcccgtcaggtg
gaagaagtgctttatcccgctatggaagactacgccatcgatatcatgatcggtaagggt
cccaccgcccggagcatccgtgtggacctgccgaagttcaccctggtcggtgccaccacc
cgcgccggacagctttccgcccccctgcgggaccgtttcggtatgctgttccgcctggaa
atgtatacgcctgaagagctccggcagatcgtggaacgcagcgccggcatcctcggtgtg
gacgcggatccggaaggcctgctggagatcgcccgccgcagccgcggtacgccccgtatc
gccaaccgtatgctcaagcgcgtccgggactatgccgaagtgaaggccggcggccatatc
agccgggatatcgcccgggaagccctggccctgctggacgtggatgaacttggcctggac
aaggtggatcggaacattctttcctgcatgatggacaagtttgccggcggcccggtcggc
ctggataccctggcggccaccaccggcgaggacgccgtcaccattgaggacgtatatgag
ccttatctgatgcagctgggcttcctcatgcggactccccgcggacgggtctgcaccccc
gccgcctggaaccatatgaaaaagaacatgcctgcctccgcagaagcccaaatcaggatg
gagatctga
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