Aristaeella hokkaidonensis: JYE49_14100
Help
Entry
JYE49_14100 CDS
T09243
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ahc
Aristaeella hokkaidonensis
Pathway
ahc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYE49_14100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahc03019
]
JYE49_14100
Enzymes [BR:
ahc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JYE49_14100
Messenger RNA biogenesis [BR:
ahc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JYE49_14100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF4774
AAA_22
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
QUC66950
LinkDB
All DBs
Position
complement(3145810..3147234)
Genome browser
AA seq
474 aa
AA seq
DB search
MEFKDLGLSPSLLKNIRDTGYETPTPIQQATIPLVLEGKDVLGCAQTGTGKTAAFALPIL
QRLKEIPPQRSNAKVIRCLILSPTRELAMQTWENFQLYGKGEGLDSAVIFGGVGQGGQVE
ALHRGAEIVIACPGRLLDLMGQGLVRLDWVDIFVLDEADRMLDMGFIHDVRKIVRTLPEE
RQTLLFSATMPPEVEKLALDLLTDPENVKVDPVTSTVDAIDQCLYYVDKVNKKHLLAQLL
EDPEVESALVFSRTKHGVDRIVRDLKRKGIEAAGIHGDKSQNARQAALNLFRSGKCRVLV
ATDIAARGIDVAGLSHVFNYDMPMEPEAYIHRIGRTGRAGRTGKAISFCCIDEVKQLNQV
EKLIGKRLHQKESDWPMEVTTPTPPKVREPRPARLDRQGNALAERRVAAVSAAKPSRPAH
SRPTGKVTIGRDGQVHSRPTGKVTIGRDGQVHSRPSGHGTGRPVHRVNRQKRRG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaagatctcggtttatccccttcccttctgaaaaacatccgcgataccggt
tatgaaaccccgacccccatccagcaggctaccatcccgctggttctggagggaaaggac
gtcctgggctgcgcccagacgggcaccggcaaaaccgccgctttcgccctgcctatcctg
cagcggctgaaggagattcccccgcagcggagcaacgccaaggtgatccgctgcctgatc
ctctcccccacccgggagcttgccatgcagacctgggagaacttccagctctacggcaag
ggcgaaggcctggacagcgccgtcatcttcggcggcgtcggccagggcggccaggtggaa
gccctccaccggggcgcggaaattgtcattgcctgtcccggccggctcctggacctgatg
ggccagggacttgtccgcctggactgggtggatatcttcgtgctggatgaagctgaccgc
atgctggatatgggcttcatccacgatgtgcgcaaaatcgtccgtaccctgccggaggaa
cggcagacgctgctcttctccgccactatgccgccggaagtggaaaagctggccctggac
ctgctgaccgatccggagaacgtcaaggtggatcccgtcacctctacggtggacgccatt
gaccagtgcctgtattacgtggacaaggtcaataaaaagcacctgcttgcgcagctgctg
gaggatccggaggtggaaagcgccctggtcttctcccgcaccaagcacggagtggaccgg
attgtccgggacctgaagcgcaaagggatcgaagccgccggtattcacggtgacaagagc
cagaacgcccgtcaggccgcgctgaacctgttccgcagcggcaagtgccgggtgctggtc
gccacagacattgccgcccgcggcatcgacgtggccggcctcagccatgtgttcaactat
gacatgcccatggaaccggaagcctatatccaccggatcggccgtaccggccgtgccggc
agaaccggcaaagccatctccttctgctgcatcgacgaagtgaagcagctgaaccaggtg
gaaaagctcatcggcaagcgccttcaccagaaggaaagcgactggcccatggaggttact
acgcccaccccgccgaaggtccgcgaaccccggcccgccaggctggatcgtcagggcaac
gcgctggcggagcgccgcgttgccgccgtttctgctgctaaaccttctcgtcctgcccat
tcccgtcccactggaaaggtaacaattggcagagacggacaggtacactcccgccccacc
ggcaaagtgactataggcagagacggacaggtgcattcccgcccctccggccatggcacc
ggcagaccggttcatagagtcaatcgtcagaaacgccgcggttaa
DBGET
integrated database retrieval system
