Aeromonas hydrophila YL17: AI20_00960
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Entry
AI20_00960 CDS
T03186
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ahd
Aeromonas hydrophila YL17
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahd03400
]
AI20_00960
DNA repair and recombination proteins [BR:
ahd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AI20_00960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
RecA
AAA
SLFN-g3_helicase
GvpD_P-loop
ABC_tran
AAA_22
AAA_24
AAA_14
nSTAND3
Rad51
AAA_16
NTPase_1
DUF7125
AAA_29
PAXNEB
AAA_5
Zeta_toxin
Zn_ribbon_8
zf-RING_10
DAP3
DZR
Motif
Other DBs
NCBI-ProteinID:
AHV33847
LinkDB
All DBs
Position
complement(398186..399550)
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AA seq
454 aa
AA seq
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MAKNKTAYVCTECGADFTRWQGQCSECKEWNTISEVRLGSVTPGKSARYSGYAGAVGSQV
QTLAEIATTEVPRFSSGFKELDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTMCGLAERM
KTLYVTGEESLQQVAMRASRLGLPTDKLRMLSETSVEQICLIAQQEQPQIMVIDSIQVMH
VADVQSAPGSVSQVREAAALLTRYAKQNHVAIFMVGHVTKDGTLAGPKVLEHCIDCSVLL
DGSHDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEQAPGSIVMVI
WEGTRPLLVELQALVDYSQLSNPRRVAVGMDHNRLAMLLAVLHRHGGLQMADQDVFINVV
GGVKVEETSADLALLLAMVSSFRDHSLPKDLVVFGEVGLSGEIRPVPSGQERLQEAAKHG
FRRAIVPHANAPKHPIEGMEVVPVKKLADALEAL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaacaaaactgcctatgtttgtaccgaatgtggcgccgacttcacacgctgg
cagggccagtgcagtgagtgcaaggagtggaacaccatcagcgaggtgcgcctcggctcg
gtgaccccgggcaagagcgcccgctacagcggctatgccggcgccgtcggcagccaggtg
cagacgctggcggagatcgccaccaccgaggtcccccgtttctcttccggcttcaaggag
ctggatcgggtgcttggcggcggcgtggtgccggggtcggccatcctgatcggtggcaac
ccgggggcgggcaagtcgaccctgttgctgcagaccatgtgtggcctagccgaacggatg
aagaccctgtacgtcaccggtgaggagtcgttgcagcaggtggcgatgcgggcatcgcgt
ctcggcctgcccaccgacaagctgcgcatgctgtcggagacctcggtcgagcagatctgc
ctgattgcccagcaggagcagccacagatcatggtcatcgactctattcaggtgatgcat
gtggcggatgtgcagtcagcgccggggtccgtctcccaggtgcgggaagcggcggccctg
ctgacccgctatgccaagcagaatcacgtcgccatcttcatggtgggccacgtgaccaag
gatggcaccctggccggtcccaaggtgctggagcactgcatcgactgttccgtgctgctc
gacggcagccacgactcccgctttcgcaccctgcgctctcacaagaaccgcttcggggcg
gtcaacgagctgggggtcttcgccatgaccgggcaggggatgcgggaagttagcaaccct
tccgccatcttcctcagtcgcggtgaggagcaggcgcccggctccatcgtgatggtgatc
tgggagggcacgcgtccgctgctggtggagttgcaggcgctggtagactactcccagctc
tccaatccacgccgggtggcggtggggatggatcacaaccggctcgccatgctgctggca
gtgctgcatcgccacggtgggttgcagatggcggatcaggatgtcttcatcaacgtggtc
ggcggggtcaaggtagaggagaccagtgcggatctggctctgctgctggccatggtttcc
agttttcgcgatcactccctgcccaaggatctggtggtgttcggcgaggtggggttgtcc
ggcgagatccggcccgtgccgtccggccaggagcggttgcaggaggcggccaagcatggc
ttccgccgggccatagtgccgcacgccaatgcccccaagcatcccatcgagggcatggaa
gtggtgccggtcaagaagctggccgatgccctggaggcgctgtaa
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