Aeromonas hydrophila YL17: AI20_01700
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Entry
AI20_01700 CDS
T03186
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ahd
Aeromonas hydrophila YL17
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahd03016
]
AI20_01700
Enzymes [BR:
ahd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AI20_01700
Transfer RNA biogenesis [BR:
ahd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AI20_01700
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHV33975
LinkDB
All DBs
Position
265531..266058
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AA seq
175 aa
AA seq
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MAKLFFALPAEALAADIVAWRDQLPWPGQPVPAANLHLTLAFLGEADETTTAQLMAAVER
QHCPPLTIALNETGWFGRAKAAWIGPKEWPNELTVLARALRRHGEKLGLGNGEQGYRPHV
TLSRKASEPPALLPAPDFVLRADRFCLYQSISTLDGVRYEPLACWPLRAREKMAS
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactcttctttgccctgcccgccgaggcgctggccgccgatatcgtcgcctgg
cgcgatcaactgccctggccgggccagccggtccccgccgccaacctccacctgacactg
gccttcctcggcgaagcggatgagaccaccaccgctcagctgatggctgctgtcgagcgt
caacactgtccgccgctcaccatagcgctcaatgaaaccggctggttcggccgcgccaag
gccgcctggattggcccgaaagagtggcccaacgagctcaccgtgctggccagggcgctg
cgccgccacggcgaaaaactggggcttggcaacggcgagcagggctatcgccctcacgtc
accctgtcgcgcaaggcgagcgagccgccggcgctgctgcccgcccccgactttgtgctg
cgggccgaccgcttctgcctctatcaatccatctcgaccctggacggggtgcgctacgag
cccctcgcctgctggccgctacgggccagagagaagatggcatcctga
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