Aeromonas hydrophila YL17: AI20_02865
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Entry
AI20_02865 CDS
T03186
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ahd
Aeromonas hydrophila YL17
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahd03016
]
AI20_02865 (truB)
Enzymes [BR:
ahd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AI20_02865 (truB)
Transfer RNA biogenesis [BR:
ahd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AI20_02865 (truB)
Prokaryotic type
AI20_02865 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AHV34175
LinkDB
All DBs
Position
complement(3348..4298)
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AA seq
316 aa
AA seq
DB search
MSRRRRFKGRDVHGILLLDKPTGLTSNDVLQKVKRIYNAAKAGHTGALDPLATGMLPICL
GEATKFSQYLLEADKRYEVTAKLGERTNTSDSDGEVVSTRPVNVAVGTLIEVLDQFRGPI
MQVPSMYSALKHNGRPLYEYAREGIEIEREARPITVFELKLLSFEGDEVRLEVHCSKGTY
IRSLVDDLGEVLGCGAHVTQLRRTQVASYPYERMLTLEQLECIFEQAKAESIPPREQLDP
LLLPMDTAVASLPEVNMLAAVAAYVNQGQAVQVAGSPQSGQVRMTVGPEREFIGVGEIDD
EGRVAPKRLVRYHDEE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtagacgtcgtttcaagggccgtgacgtacacggtatcctgctgctggacaag
ccgaccggcctgacctccaacgatgtgttgcagaaggtcaaacggatttacaacgccgcc
aaggccggtcacaccggtgctctggacccgctggcaaccggcatgctgccgatctgcctc
ggcgaggccaccaagttctcccagtatctgctggaggcggacaagcgctatgaggtgacc
gccaagctgggcgagcgcaccaacaccagcgactccgatggcgaggtggtctccacccgt
ccggtgaacgtggccgtgggtaccctgatcgaggtgctggaccagttccgcggccccatc
atgcaggtgccgtccatgtattcggccctcaagcacaacggccgcccgctctacgaatat
gcccgcgaaggcatcgagatcgagcgggaagcccgtcccatcaccgtcttcgagctcaaa
ctgctgagctttgaaggagatgaggtgcgacttgaggtgcactgcagcaagggtacctac
attcgctccctggtggacgatctgggggaagtgctgggctgtggcgcccacgtcacccag
ctgcgccgcacccaggtggccagctacccctatgagcggatgctgaccctggagcagctc
gagtgcatcttcgagcaggccaaggccgagagcattccgccgcgcgagcagctggatccc
ctgctgctgccgatggataccgcggtggcttccctgcccgaggtgaacatgctggctgcc
gtggccgcctatgtgaaccagggccaggccgtgcaggtggcaggcagcccgcagagcggc
caggtccgcatgacggtcggcccggagcgcgaattcatcggggttggcgagatcgacgac
gagggacgcgtggcgcccaagcgtctggtgcgctaccacgacgaggagtga
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