Aeromonas hydrophila YL17: AI20_03315
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Entry
AI20_03315 CDS
T03186
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K22051
miniconductance mechanosensitive channel
Organism
ahd
Aeromonas hydrophila YL17
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ahd02000
]
AI20_03315
Transporters [BR:
ahd02000
]
Other transporters
Pores ion channels [TC:
1
]
AI20_03315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Vip3A_N
Motif
Other DBs
NCBI-ProteinID:
AHV34264
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Position
4704652..4707930
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AA seq
1092 aa
AA seq
DB search
MLQRLLSLLLCLTLLSPLAQADDAITQVEELLQSVPKTDTPENQKLRESYQQALQFAREA
QRYREQGKAYQQVLIDYPKESARLKESLHNYQPQPRPALSSLKEEALRQAIGLSSNRQLN
LRKERQGVMDSLNQLESTGQEYHLRVDELRKQLQQTRALLDRLSFSSESDRQQDAQQLVT
RLKEQSLSDRIQMLELEQLSAQQRNDLGKLRLQELNLAITDEDEWQTSLLNQQNQLRRDK
TEQALAESERLRKQLTSDMPLLLEQQQQNQALSIQLGALEDQIERVQDEQRVIDTNLSTL
NDLVNSVREQLEWLQISNAYGENLRSKLSDLPAYFPLDKLESAIVNARMAKYQYETEQDA
LKDPRQLRDQLLATDGITLDRAQLAVLDNLLKARRQLLTRLNDAADSLIQEQTRLKLLYS
RQNSKIDEIRELSASHLFWMPDVRPLTPAVLLGVPAALGLALNPVNWLQLPQAIAENNPI
TLTFAGIGILVLAWCWFKLARHLTHYSQYIAPRIGKVTQDKFSLTSRLLMRSLLASLPLP
AMVLMVRGLLDGAWQYPFAVAVARGLGEIWFLLLALLMARHLTLEKGILILHFRWQKERV
QKVWSQFRTLLLVIIPSFFVQGMANSYQEHAFYDSLGRLAFIVGALWLLLFFARLNRERL
PLTWGQADMSKPHLLHHFIWNSLMLAPLLAVIGSLLGYFYTSRILLRQLELSLLMGLGCL
LVYYLAHRWMLIQRRRLAFERAKSKRAEILAQRGREEGHDELSSEIPDVVEDTELDLDTI
SAQSLGLVRTLLMLGFTMLVVVQWSELNSAFSFLRSIEVWQVSSKIGGIEQVVAITLQDL
MLTAFTFILTVVTARNLPGLMELTLLQHLSLSPGTGFAITTVTKYIVLVVGALTGFSILG
IDWSKAQWMVAALSLGLGFGLQEIFANFVSGLIILFEKPIRLGDTVTIRELTGTVTKIKT
RATTIVDWDRKEIIVPNKAFITEQFINWSLSDAITRVRLRIRIGLTQEPRKIQTILEESI
KASTLVLETPSPEVFLIEFTDSALIYEIRLYVNSMDHRMPITHEVHSLVLEKLQQQGLGL
PHQQIDIRLSRA
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaacgcctgctctccctgctgctctgccttactcttctttctccccttgcccag
gccgatgacgccatcacccaggtggaagagctgctgcagagcgtgcccaagacggacacc
ccggagaaccagaagctgcgggagagctaccagcaggcgctgcaatttgcccgggaagcc
cagcgctatcgcgagcagggcaaggcctatcagcaggtgctcatcgactatcccaaggag
tcggcccgcctcaaggagagcctgcacaactaccagccccagcctcgccctgccctctcc
tccctgaaggaggaggcgctgcgccaggccatcggcctgagcagcaaccgccagctcaac
ctgcgcaaggagcgccagggggtgatggacagcctcaaccagctggagagtacaggtcag
gagtatcacctgcgggtcgacgagctgcgcaagcagttgcagcagacccgtgccctgctc
gatcggctcagcttcagcagcgaatctgaccgccagcaggatgcccagcagctggtgacc
cgcctcaaggagcagagcctctccgaccggatccagatgctggagctggagcagctctct
gcccagcagcgcaacgatctgggcaagctcaggctgcaggagctcaacctcgccatcacc
gacgaggacgagtggcagaccagcctgctcaaccagcagaaccagctgcgccgcgacaag
acagaacaggcactggcggagagcgagcgcctgcgcaagcagctcacctccgacatgccg
ctgctgctggagcagcaacagcaaaaccaggcgctctccatccagctcggcgcgctcgaa
gatcagattgagcgggtgcaggacgagcagcgggtgatcgacacgaacctctcgaccctg
aacgacctggtcaactcggtgcgcgagcaactggagtggctgcagatcagcaacgcctac
ggcgaaaacctgcgcagcaagctctccgacctgcccgcctacttccccctcgacaagctg
gagtcggccatcgtcaacgcccgcatggccaaataccagtacgagaccgagcaggatgcc
ctcaaggatccgcgtcagctgcgcgatcagctgctggccaccgacggcatcaccctggat
cgcgcccagctggcggtgctcgacaacctgctcaaggccagacggcagctgctgacccga
ctcaacgacgccgctgacagcctcattcaggagcagacccggctcaagctgctctacagc
cgccagaacagcaagatcgacgagatccgcgagctcagcgccagccacctgttctggatg
ccggacgtgcgcccgctcaccccggccgtgctgctcggggtgccggccgccctcggcctt
gccctcaacccggtcaactggttacagctgccccaggccatcgccgagaacaatcccatc
accctcaccttcgccggcatcggcatcctggtgctggcctggtgctggttcaagctggct
cgccacctgacccactacagccagtacatagcgccccgcatcggcaaggtgactcaggac
aagttcagcctcaccagccgactgctgatgcgctccctgctcgcctccctgccgctgccc
gccatggtgctgatggtgcgcggcctgctcgacggcgcctggcaatacccgttcgcggtg
gcggtggcccgcggcctcggcgagatctggttcctgctgctggcactgctgatggcccgc
cacctgacgctggagaaggggatcctgatcctccatttccgctggcagaaggagcgggtg
cagaaggtgtggagccagtttcgcaccctgctgctggtgatcatcccgagtttcttcgtg
caaggcatggccaacagctatcaggagcacgccttctacgattccctcggccggctggcc
ttcatcgtcggcgccctctggctgctgctgttctttgcccgcctcaaccgggagcggctg
ccgctcacctggggccaggccgacatgagcaagccccacctgctgcaccacttcatctgg
aacagcctgatgctggcgccgctgctggcggtgatcggctccctgctcggctacttctat
acctcccgcatcctgctgcgccagctggagctgagcctgctgatggggctgggctgcctg
ctcgtctactatctggcgcaccgctggatgctgatccagcgtcgtcgcctcgccttcgag
cgagccaagagcaagcgcgccgagatcctggcccagcgcggccgggaagagggacacgac
gagctcagctccgagatcccggacgtggtggaggacaccgaactggatctggacaccatc
agtgcccagtccctcgggctggtgcgcaccctgctgatgctgggcttcaccatgctggtg
gtggtgcagtggtccgaactcaactcggcgttcagcttcctgcgcagcatcgaggtgtgg
caggtaagcagcaagatcggcggcatcgagcaggtcgtcgccatcaccctgcaggatctg
atgctgacggccttcaccttcatcctgaccgtggtcaccgcccgcaatctgccgggcctg
atggagctgaccctgctccagcacctgagcctctcccccggcaccggcttcgccatcacc
acagtgaccaagtacatagtgctggtggtgggggcgctgaccggcttctccattctcggc
atcgactggtccaaggcgcagtggatggtggcggccctctccctgggcctgggtttcggt
ctgcaggagatcttcgccaacttcgtctccggcctcatcatactgttcgagaaaccgatc
cggctcggcgacactgtcaccatccgcgagctgaccggcaccgtcaccaagatcaagacc
cgcgccaccaccatagtggattgggacaggaaggagatcatcgtccccaacaaggccttc
atcaccgagcagttcatcaactggtcgctgtccgacgccatcacccgggtacggctgcgc
atccgcatcggcctgacccaggagccgagaaagatacagaccattctggaagagtcgatc
aaggcctccaccctggtgctggagaccccctcccccgaggtgttcctgatcgaattcacc
gactcggcgctgatctacgagatccgactctacgtgaacagcatggatcaccgcatgccc
atcacccacgaggtccattcgctggtgctggagaaactgcagcaacaggggctggggctg
ccgcaccagcagatcgacattcgtctgagccgggcctga
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integrated database retrieval system
