Aeromonas hydrophila YL17: AI20_06340
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Entry
AI20_06340 CDS
T03186
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
ahd
Aeromonas hydrophila YL17
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahd03400
]
AI20_06340
DNA repair and recombination proteins [BR:
ahd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AI20_06340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
AAA_22
SLFN-g3_helicase
DUF7577
AAA_16
DZR
AAA
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
AHV34817
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All DBs
Position
3994303..3996063
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AA seq
586 aa
AA seq
DB search
MFVLRPYQTDAVNAVISHFRKHPDPAVVVLPTGAGKSLVIAELARKARGRVLVLAHVKEL
VEQNHAKYEAWGLQADIFAAGLNRKEARAQVVFGSVQSVARNLDAFDGAFSLLIIDECHR
VSLDDDSQYHQVLGHLKAANPALKILGLTATPYRLGLGWIYRRHYHGMVKSHGERLFGDC
VFELPLRFMVKNGYLTPPRMVDAPIVHYDFSRLVPRENGLFSEADLNGELKRQERVTPHI
LSQVLEYARERQGVMIFAATVEHAREIHGLLGARGEQAALITGDTPGPERDALISAFKAR
ELKFLVNVAVLTTGFDAPHVDLIVMLRPTESVSLYQQIVGRGLRLSPGKHDCLVLDYAGN
NFNLFAPEVGEPRPHAGTEPVQVPCPACGFANTFWGKTDEDGKVIEHYGRRCQGLFEDDE
GNREECDYRFRAKICPACGGENDIAARRCQSCDQLLVDPDDKLKEALNLKDCMVIRCAGL
TLAAGRGKQGERLEVVYHDEDGLTLNEYFGFHSAGARRLFQQHFVRHHWPAPGLEPEFAT
LASVLAVEHQFRHPDFVIARKSGRFWQIKEKIFDYDGRYRTANSLT
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttctcagaccctaccagaccgacgccgtcaacgccgtcatcagccactttcgc
aaacacccggatcccgccgtggtggtgctgcccaccggggccggcaagagtctggtgatc
gccgagctggcccgcaaggcgcgcggccgggtgctggtgctggcccacgtcaaggagctg
gtggagcagaaccacgccaagtacgaagcctgggggctccaggccgacatcttcgccgcc
ggcctcaatcgcaaggaggcccgcgcccaggtggtgttcggctcggtgcagtcggtggcg
cgcaatctggacgccttcgacggcgctttttcgctgctcatcatcgacgagtgccaccgg
gtctcgctcgatgatgacagccagtaccatcaggtgttaggccacctcaaggccgccaat
ccggccctcaagatcctcggcctcaccgccactccctatcggctggggctgggctggatc
taccggcgccactaccacggcatggtcaagagccacggcgagcggctgttcggcgactgc
gtgttcgagctgccgctgcgcttcatggtcaagaacggctacctgacgccgccgcgcatg
gtggatgcccccatcgtccactacgacttcagccggctggtaccgcgggagaatggcctc
ttcagcgaggcggatctcaacggcgagctcaagcgtcaggagcgggtcaccccccatatc
ctgagccaggtactggagtatgcccgcgagcggcagggggtgatgatcttcgctgccacc
gtcgagcatgcccgggaaattcacggcctgctgggtgccagaggggagcaggcggccctc
atcacaggtgacaccccggggccggagcgcgacgccctcatcagcgccttcaaggcgcgc
gagctcaagtttctggtcaacgtggcggtgctcaccaccggcttcgatgcccctcatgtc
gacctcatcgtgatgctgcgccccaccgagtcggtctccctctaccagcagatcgtgggc
aggggcctgcgcctgtcgcccggcaagcacgactgtctggtgctcgactacgccggcaac
aacttcaacctgttcgctcccgaagtgggggagcccagaccccatgccggcaccgagccg
gtgcaggtgccctgccccgcctgcggctttgccaacaccttctggggcaagaccgacgag
gatggcaaggtgatcgagcactacggccgccgctgtcaggggctgtttgaagatgacgag
ggcaaccgcgaggagtgcgactatcgctttcgcgccaagatctgccccgcctgcggcggt
gaaaacgacatcgccgcccgccgctgccagagctgcgatcaactgctggtggaccctgac
gacaagctcaaggaggcgctcaatctcaaggattgcatggtgatccgctgcgcggggctg
accttggcggccgggcgcggcaaacagggggagcggctggaggttgtctatcacgacgag
gatggcctcaccctcaatgagtacttcggatttcactcggcaggcgcacggcgcttgttt
caacagcactttgtgcgtcatcattggcccgccccggggctggagcccgaatttgccacc
ctggcgagcgtgctggcggtggaacatcagtttcgccaccccgattttgtcatcgcccgc
aagtcagggcgcttctggcagatcaaagagaagatttttgattatgacggccgctatcgc
accgccaattcactgacgtga
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