Aeromonas hydrophila YL17: AI20_11340
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Entry
AI20_11340 CDS
T03186
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ahd
Aeromonas hydrophila YL17
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ahd01011
]
AI20_11340
Enzymes [BR:
ahd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AI20_11340
Peptidoglycan biosynthesis and degradation proteins [BR:
ahd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AI20_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
Pilus_CpaD
Motif
Other DBs
NCBI-ProteinID:
AHV35760
LinkDB
All DBs
Position
complement(2834201..2835748)
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AA seq
515 aa
AA seq
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MKVRTALLAALFLSGCQNLSHQDDRALTAIEPIKSPQVNKKAYKKHSARFLFGDEQIDEL
DDTDNLWVRISDDMQFDPQENDRVRQQRDWLLRNDKHLATIASRAEPYLYLMVEEIERRE
LPMELITIPMIESMFDPHARSRSNAVGLWQFVPATGKNFGLRHDNWYDGRRDVLASTNAA
LDYLEYLNRFFDGDWLQTLAAYNAGEGRVRNAIIRNQKAGRPTDYWSLDLPRETRMYVPK
ILAMADMIRNADKYNVTLPVLANKPQLRVVNTGGQIDLNVAAQLAGLRPAQLKEVNPALT
RWSTSPKGPYRLLVPVEYADTLELALADLPQSERIRTRSYQVTSGDTLSRIAQNHGVSVQ
QIKLANNLRSNNLRRGQTLMIPTSGSKPVVSQNVQSKPQQLASRGSGKIQYKVRAGDNLW
SISQAHGVTHDELAKWNGLNAKSALKPGMKLVVWPKQGKGGNKSMVYQVRRGDSLSSIAA
RFQVAVMDVMRWNQLGKSDYLKPGQELTLFVKNNS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtacgaacggccttattggcggcgctgtttctcagcggctgccaaaacctgagc
catcaggatgaccgggcgctaacggcaatcgagccgatcaagtccccccaagtcaacaaa
aaagcgtataaaaaacattctgcgcgcttcctgttcggtgacgaacagatcgacgaactg
gatgacaccgataacctgtgggtgcgtatcagcgatgatatgcagtttgatccgcaggag
aacgaccgtgtccgccagcagcgtgattggttgttgcgcaatgataagcatctggcgacc
attgccagccgggctgagccctacctgtatctgatggtagaggaaatcgaacggcgtgag
ctgccaatggagcttattaccattcccatgatcgagagcatgttcgatccccacgcccga
tcccgcagcaatgcggtgggtctgtggcagttcgttcctgcgaccggtaaaaacttcggc
ctgcgccacgacaactggtacgacggccgccgcgatgtactggcctccaccaatgccgcg
ctggattatctggagtacctgaaccgtttcttcgacggcgactggctgcagacgctggcc
gcctacaatgccggtgaaggacgggtgcgcaacgccatcatccgcaatcagaaggctggc
cggccgaccgactactggtcgctcgatctgcctcgcgagacccggatgtacgtgcccaag
atcctggccatggctgacatgatccgcaatgcggacaagtacaatgtcaccctgccggtg
ctggccaacaaaccgcaactgcgggtggtcaacacgggaggtcagatcgacctgaatgtg
gcagcccagctggcgggcctgcgcccggcccagctgaaagaggtcaatccggcgctgacc
cgctggtcgacctcgcccaagggcccctatcgcctgctggtaccggttgaatatgccgat
accctggagctggccctggccgacctgccgcagagcgagcgcatccgcacccgctcctat
caggttaccagtggcgacaccctctcccgcatcgcccagaatcacggggtgagcgtgcag
cagatcaagctggccaacaacctgcgcagcaacaacctgcgccgtggtcagaccctgatg
atcccgaccagcggcagcaaaccggtggtcagccagaacgtccagagcaagccacagcag
ctcgccagccgtggcagcggcaagatccagtacaaggtgcgggccggcgacaatctgtgg
agcatcagccaggcacacggggtgacccatgacgagctggccaagtggaacggtctcaac
gccaaatcggccctgaaaccgggcatgaagctggtggtctggcccaagcagggcaagggt
ggcaacaagtccatggtctatcaggtgcgccgcggcgattccctctcctccatcgcagcc
cgctttcaggtcgccgtgatggacgtgatgcgctggaatcagctgggcaagagcgattac
ctcaagccgggtcaggagctgaccctgttcgtgaagaacaacagctga
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