Aeromonas hydrophila YL17: AI20_12225
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Entry
AI20_12225 CDS
T03186
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K02405
RNA polymerase sigma factor FliA
Organism
ahd
Aeromonas hydrophila YL17
Pathway
ahd02020
Two-component system
ahd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AI20_12225
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AI20_12225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahd03021
]
AI20_12225
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ahd02035
]
AI20_12225
Transcription machinery [BR:
ahd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AI20_12225
Bacterial motility proteins [BR:
ahd02035
]
Flagellar system
Flagellar assembly proteins
Stator
AI20_12225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
TY-Chap3
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
AHV35929
LinkDB
All DBs
Position
2644055..2644774
Genome browser
AA seq
239 aa
AA seq
DB search
MNKAQAYLRHQDSYVLVERHAPLVKRIAQHLLARLPSSVLLDDLIQAGMIGLLEASRNFD
GSKGASFETYAGIRIRGSMLDEIRRGDWVPRSVHRNSRTIAEAIENVEQTHGRDARDTEV
AAQMGVSLAEYHTMLQDVSCGKIIGIEDLGVSEDVIGHPDDEPGSNGFDELAAERFQGAL
AEHIARLPEREALVLSLYYDEELNLREIGEVLNVSESRVSQIHSQAMHRLRARLRDWHV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcccaagcgtacttgcgtcatcaggattcctacgtgctggtcgagcgccat
gctccgctggtgaagcggatcgcccagcatttgttggctcgcctgccaagcagtgtcttg
ctggatgacctgatccaggcaggtatgattgggttgctcgaagcctcccgcaactttgat
ggcagcaagggggccagttttgaaacctacgccgggatccgcatccgcggctccatgctg
gacgagatccggcgcggtgactgggtgcctcgctcggtgcaccgcaacagccgcaccata
gccgaagccatcgaaaatgttgaacaaacccacggtcgtgatgctcgcgacaccgaagtg
gccgcccagatgggggtcagcctcgccgagtatcacaccatgctgcaggatgtgtcctgc
ggcaagatcatcggcatcgaggatcttggtgtcagcgaggacgtcatcggtcaccccgat
gacgagccgggcagcaacggctttgatgaactggcggccgaacgtttccagggggcgctg
gccgaacacattgcccgtctgccggaacgggaagcgctggtgctctccctttactacgat
gaagaactgaacttgcgtgaaataggcgaggtattgaacgtcagcgagtctcgcgtgagc
cagatacatagtcaggcgatgcacagattacgcgcgcgtttaagagattggcatgtataa
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