Aeromonas hydrophila YL17: AI20_12390
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Entry
AI20_12390 CDS
T03186
Name
(GenBank) peptidase C39
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
ahd
Aeromonas hydrophila YL17
Pathway
ahd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AI20_12390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ahd02000
]
AI20_12390
02044 Secretion system [BR:
ahd02044
]
AI20_12390
Transporters [BR:
ahd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AI20_12390
Secretion system [BR:
ahd02044
]
Type I secretion system
RTX toxin transporter
AI20_12390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
Peptidase_C39
DUF87
DEAD
AAA_29
TMEM208_SND2
ATP-synt_ab
RsgA_GTPase
SLFN-g3_helicase
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
AHV35962
LinkDB
All DBs
Position
complement(2598732..2600819)
Genome browser
AA seq
695 aa
AA seq
DB search
MTAHDESVLACLKIITGLLGCPPKDIDITPDEPFDIIIDRLQQQTDSRIRQRHIAPRKLA
KQTLPLVLLSDSGAPFVLAQRQGEQALILDPAVGNPQIIDQQELLARWNGRVYQVRRQQS
RFDIRWFIPAFLQQKRLLGEILLFSLVLQLLALISPLFFQVVMDKVLVHQAWSTLDVLVL
GLLITALVEVCLRGLREYQYAHTANRIDIQLGLRMVQHLFALPLLYFKSRQVGAIVTRVQ
ELNTIREFLTGTMFTLTVDVLFMFVFLAVMASLSGMLTLVILLSIPAYVLIAWWITPRMQ
QAVEQQFGHAAANTAFLNETVAGAETLKSLALEPRFVRRWDEQTSQMVTAGYRVQQLNNA
SQHGVMWLQKLVSAGVLWLGASEVISLQLTIGQLIAFNMMAGHVAQPLSRLVELWGQFIQ
TRIAVDKLGDMLNLPPEHQRDGAGQVSAGAIQLERVRFRYQPDTPLIIDDLSLTIAPGET
LGVVGGSGSGKSTLARLLLRLYQPEQGEIFIDGQPIRQLPLHHLRQQMGVVLQENHLFNK
SVRDNIAQSVPHASLDQIIRAATLAGAHDFILRLPLGYDTVLAEGGSSLSGGQRQRLAIA
RTLLADPRLLIFDEATSALDDESQALIQRNMRQIACGRTVITIAHRLSTVRQCDRIIVLQ
RGKIVEQGDHASLLARGEHYARLWRLQQDLHEETP
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgcatgacgagtctgttttggcatgcttgaagattattaccggattattgggc
tgtccccctaaagatatagatatcacgccagacgaaccctttgatattattatcgatagg
ctgcagcagcagaccgacagccggatccgccaacgtcacatcgctccccgcaaactcgcc
aaacagacgctccccctggtgctgctcagtgacagcggcgcccccttcgtgctggcccag
cgccagggggaacaggccctgatcctggaccccgccgtcggcaacccgcagatcatcgac
cagcaggaattgctggctcgctggaacgggcgtgtctatcaagtgcgcaggcaacagagc
cgctttgacatccgctggttcattcccgccttcctgcagcaaaaacggctgctgggggag
atactgctcttttcactggtcttgcagctcctggcgctgatctccccgctcttttttcag
gtcgtcatggacaaggtgctggtgcatcaggcctggtcgacgctggacgtgctggtgtta
gggctactgatcaccgcattggtggaggtctgcctgcgcgggttgcgggaatatcagtac
gcccacaccgccaaccggatcgacatccagctcggcctgcgcatggtgcagcacctgttt
gccctgcccctgctctatttcaagagccgccaggtgggcgccatcgtgacccgggtgcag
gagctcaacaccatccgcgagttcctgaccggcaccatgtttaccttgacggtggacgtg
ctgttcatgttcgtcttcctggcggtcatggccagcctctccggcatgctgactctggtg
atcctgctctccatccccgcctatgtgctgatcgcctggtggatcaccccgcgcatgcaa
caggcggtcgaacagcagttcggccacgccgccgccaacaccgccttcttgaacgagaca
gtcgccggcgccgagaccctcaagagcctggcgctggagccgcgcttcgtgcggcgctgg
gatgagcagaccagccagatggtgaccgccggttaccgggtgcagcagctcaacaacgcc
tcccagcacggcgtcatgtggctgcaaaaactggtgagcgccggcgtgctctggctcggc
gcgagcgaggtgatcagcctgcagctcaccataggccagctcatcgccttcaacatgatg
gccggccacgtggcccagcccctgtcacggctggtggagctgtggggccagttcatccag
acccggatcgcggtagacaaattgggtgacatgctcaacctgccccccgagcatcagcgt
gacggcgcgggtcaggtgagtgccggtgccattcaactggagcgggtgcgctttcgctat
cagccggacacccccctcatcatcgatgatctctccctcaccatagcgcccggtgaaacg
ctgggggtggtcggcggttcaggctcgggcaagagcaccctggccaggctgctgctgcgc
ctctatcagcccgagcagggcgagatcttcatcgacggccagcccatccgccagctcccc
ctccaccacctgcgccagcagatgggggtggtgctgcaggagaaccacctgttcaacaag
tcggttcgggacaacatcgcccagtcggtgccccatgccagcctggaccagatcatccgg
gccgccaccctggccggcgcccacgacttcattctgcggctgccccttggctatgacaca
gtgctggcggaggggggcagctcgctctccggcggccaacgccagcgcctcgccatcgct
cgcaccctgctggccgaccccaggctcctcatcttcgacgaggccaccagcgccctcgac
gatgagtcgcaggccctgatccagcgcaacatgcgccagatcgcctgcggccgcaccgtc
atcaccattgcccaccgtctctccaccgtgcgccagtgcgaccgcatcatagtcctgcaa
cgcggcaagatagtggagcagggcgaccacgccagcctgctggcgcgaggagagcactac
gcccgcttgtggcgactgcagcaggacttgcacgaggagaccccatga
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