Aeromonas hydrophila YL17: AI20_13125
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Entry
AI20_13125 CDS
T03186
Name
(GenBank) cell wall degradation protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ahd
Aeromonas hydrophila YL17
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ahd01002
]
AI20_13125
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ahd01011
]
AI20_13125
Peptidases and inhibitors [BR:
ahd01002
]
Cysteine peptidases
Family C82
AI20_13125
Peptidoglycan biosynthesis and degradation proteins [BR:
ahd01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AI20_13125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
Motif
Other DBs
NCBI-ProteinID:
AHV36096
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All DBs
Position
2440620..2442104
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AA seq
494 aa
AA seq
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MGKKYWLALANLIWLGCWPAAMVQASEGQVVVSNAAEQHDWYQNRTAEQARQELEQQLQE
AVLAQLHPDFYTLWKKLQAKPADQRGALYDEAFGKLARFQQAWRAMDLVSREQMQTLKLN
LNKPLAHEPAGDNLLEQVKQLRPQVAEYEAVREEVRKLLALPMAKKWPTLTMPTLRAGEV
SPELGQIRSILNELGDTAPRHDDATYDDDTLQAVKQFQRRHGLTADGIIGRQTRSWLNTG
PEVRASLLLRNLWRRDLVDQLSGARYVLVNIPDYRLSVVESGNEVFTSRVIVGKEQRATP
ILASEIRSIVLNPAWHVPRSILSKDILPKLGRDPAYLNREQFEVIDGEGNPVQFTEEGWQ
QALASGFPYRLRQKPGDHNALGRYKFYLPNNEAIYLHSTPRKALFEQGARAFSSGCIRVE
HADDLAELLLADSRYQPDKVASILKESQTKWLPLTTPIPVFTVYWSSWIDEEGRQQLRND
IYGFDRVSYQSRLL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagtattggctggcattggcaaacctgatctggctgggctgctggccagcg
gccatggtacaggccagcgaaggccaggtggtggtgagcaatgcggcggagcagcatgac
tggtatcagaaccggacggcggagcaggccaggcaagagctggagcagcaactgcaggag
gccgtgctggcccagctgcacccggatttctatacgctctggaagaaactgcaggccaag
ccggcggatcagcgtggcgccctctatgacgaggcgtttggcaagctggcccggttccag
caggcctggcgcgccatggatctggtctcccgcgagcagatgcagaccctcaaactcaat
ctgaacaagccgctggctcacgagccggccggcgacaacctgctggaacaggtcaagcag
ctcagaccccaggtcgcggaatacgaggcggtgcgcgaggaagtgcgcaagctgctggcg
ctgcccatggccaagaagtggccgaccctgaccatgccaaccctgcgggccggcgaggtt
tctccggagctgggccagatccgctccatcctcaacgagctgggcgacacggccccgcgc
catgacgatgccacctacgacgacgacaccctgcaggcggtcaagcagttccagcgccgc
cacggcctgaccgccgacggcatcataggccggcagacccgcagctggctcaacaccggg
cccgaggtgcgcgccagcctgctgctgcgcaacctgtggcgacgcgatctggtggatcag
ctctccggtgcccgctacgtgctggtcaacatccccgactatcggctgagcgtggtggag
tccggcaacgaggtgtttaccagccgggtgatcgtgggcaaggagcagcgggctaccccg
atcctcgccagcgagatccgctccatcgtgctcaacccggcctggcacgtgccgcgctcc
atcctgagcaaggacattctgcccaagctggggcgcgatcccgcctacctcaatcgcgag
cagttcgaggtgatcgacggcgaaggcaatccggtacagttcaccgaagagggctggcag
caggcactggcgtccggtttcccctatcgtctgcggcaaaagccgggcgatcacaatgca
ctgggtcgctacaagttctatctgcccaacaacgaggcgatctacctgcactccaccccg
cgcaaggcgctgttcgagcagggggcgcgcgcctttagttcgggttgcatccgggtggag
cacgccgacgatctggccgagttgctgctggcggactcccgctaccagcccgacaaggtg
gccagcatcctgaaagagagccagaccaagtggctgccgctgaccactccgatcccggtg
ttcaccgtctactggagcagctggatcgacgaggaggggcgtcagcaactgcgcaacgac
atctatggatttgatcgagtcagctaccagagtcgcctgctgtga
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