Aeromonas hydrophila YL17: AI20_15070
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Entry
AI20_15070 CDS
T03186
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
ahd
Aeromonas hydrophila YL17
Pathway
ahd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AI20_15070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahd03021
]
AI20_15070
Transcription machinery [BR:
ahd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AI20_15070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SQS_PSY
Dicty_REP
CENP-B_dimeris
Motif
Other DBs
NCBI-ProteinID:
AHV36454
LinkDB
All DBs
Position
2017607..2019463
Genome browser
AA seq
618 aa
AA seq
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MEQTPQSQLKLLVAKGKEQGYLTYAEVNDHLPQDIVDSDQIEDIIQMINDMGIQVVENAP
DADDLIMAEGGTADEDAAEAAAQALASVESEIGRTTDPVRMYMREMGTVELLTREGEIDI
AKRIEDGINQVQSSVAEYPEAITYLLEQYDKYEAEQLRLSDIISGFIDPNETDDVAPTAT
HIGSELSEEDLADEDEDEDEDEDGDGDDSDDDGDGGPDPEVAREKFGELRAQYEVTRLSI
QQNGRAHEDTQNAIAQLADVFRQFRLMPKQFDRLVNNMREMMERVRVQERIIMKLCVEQA
KMPKKTFVAAFTNNECETAWFEYQKQAGKAWSPRLVEMDEDVLRAIGKLQQIEEETGLSI
AQIKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKA
VDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMG
REPNPEELAMRMGMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLALPADAA
TSESLRNATREVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKAL
RKLRHPSRSEVLRSFLDE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaccccgcagtctcagcttaaactcctcgttgccaaaggtaaagaacagggc
tacctgacctatgccgaggtgaacgatcacctcccgcaagacattgtcgactctgaccag
atcgaagacatcatccagatgatcaacgacatgggtatccaggtggtggagaacgccccg
gatgccgatgatcttatcatggctgaaggtggtaccgccgatgaggacgctgccgaagca
gcggcccaggctctggcatctgttgaatccgagattggtcgcacgaccgatcccgtccgc
atgtatatgcgggaaatgggtaccgtcgaactgctgacccgcgaaggcgaaatcgatatc
gccaagcggatcgaagacggtatcaaccaggtacaaagttccgttgccgagtacccggaa
gcgattacctatctgcttgaacagtacgacaaatatgaagccgaacagctgcgcctgtcc
gacatcatctccggcttcatcgatcccaacgagaccgacgacgtcgcaccgaccgccact
cacatcggctccgagctcagcgaggaagatctggctgacgaggatgaagatgaagacgaa
gacgaagacggtgatggtgatgactccgacgatgatggcgacggtggtccggatccggaa
gttgctcgcgagaagttcggtgagctgcgcgcccagtacgaggtaacccgcctctccatt
cagcagaatggccgcgcgcacgaagatacccagaatgccatcgcccagttggcagacgtg
ttccgtcaattccgcctgatgcccaagcagttcgatcgcctggtcaacaacatgcgcgag
atgatggagcgggtccgcgtgcaggaacgcatcatcatgaaactctgcgttgagcaggcc
aagatgccgaagaaaaccttcgtcgcggccttcaccaacaacgagtgcgaaactgcctgg
ttcgaataccagaagcaggccggcaaggcctggtctccccgtctggtggagatggacgaa
gacgtgctgcgcgccatcggcaagctgcagcagatcgaggaagagaccggtctgtccatc
gcccagatcaaggacatcaaccgtcgcatgagcatcggtgaggccaaggcccgccgcgcc
aagaaagagatggtcgaggccaacctgcgtctggttatctccatcgccaagaagtacacc
aaccgcggtctgcagttcctggatctgatccaggaaggcaacatcggtctgatgaaggcg
gtcgacaagttcgaatatcgtcgtggctacaagttctcgacctacgccacctggtggatc
cgtcaggccattacccgctccatcgcggatcaggcccgtaccatccgtatcccggtgcac
atgatcgagaccatcaacaagctcaaccgtatctcccgtcagatgctgcaggagatgggt
cgcgaaccgaacccggaagagctggccatgcgcatgggcatgccggaagacaagatccgc
aaggtattgaaaatcgccaaagagcccatctccatggagacgcctatcggtgatgatgaa
gactcccacttgggcgacttcatcgaagataccaccctggccctgccggccgatgcggcc
accagcgagagcctgcgcaacgcgacccgcgaagtactggccggtctgaccgctcgtgag
gccaaggtactgcgcatgcgtttcggtatcgacatgaacactgaccacaccctcgaggaa
gtgggcaagcagttcgacgtgacccgtgagcgtatccgtcagatcgaagccaaggcgctg
cgcaagctgcgccatccgagccgctctgaagtgctgcgcagcttcctggacgaataa
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