Aeromonas hydrophila YL17: AI20_18395
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Entry
AI20_18395 CDS
T03186
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ahd
Aeromonas hydrophila YL17
Pathway
ahd03420
Nucleotide excision repair
ahd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AI20_18395 (uvrD)
03430 Mismatch repair
AI20_18395 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahd03400
]
AI20_18395 (uvrD)
Enzymes [BR:
ahd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AI20_18395 (uvrD)
DNA repair and recombination proteins [BR:
ahd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AI20_18395 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AI20_18395 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AHV37078
LinkDB
All DBs
Position
1337777..1339948
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGDS
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANCVIANN
AERLGKELWTEGAEGEPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRSNARDQGQNLWQSAKALLNDKVLTGRAGNAVRGFVELIDALEELVSLLPLHQQ
ADIAIQHSGLKAMYLAEKGEKSQARVENLDELVTACRQYQRPDELEDMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGIVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaatgacaagcaaagagacgcggtggcggcc
ccccgttgcaacctgctggtgctggccggtgccggttcgggcaagacccgggtgctggtg
caccgtatcgcctggctgatgcaggtggaacgctgttcacccttctccatcatcgcggtg
acctttaccaacaaggcggcggccgagatgcgcggccgggtcgagaaggtgatcggtgac
ggcgtgcgcggcatgtggatcggcaccttccacggcatcgcccaccgcttgctgcgggcc
caccatctggatgcggggctgccgcaggatttccagatcctcgactccgacgaccagtac
cgcctcattcgccgggtgctcaaggcgctcaacctcgacgagaagcactgggccccgcgc
gccgtgatgggctacatcaacggcaagaaggacgaggggctgcgccccggcgacatcgac
ctctacggcgaccctgtcacccgcacctatcagcaaatctacaagacctatcaggagacc
tgcgatcgctccgggctggtggattttgccgaactcttgctgcgcgcccacgagctgtgg
ctgaacaagccccacatcctcgagcactaccgcgatcgcttccagaacatcctggtggac
gagttccaggatactaacggcatccagtacgcctggctgcgtatgctggcaggggattcc
ggcaaggtgatgatagtcggcgacgatgaccagtccatctacggctggcgcggcgccaag
attgaaaacatccagcgctttctgaccgactatcagggcgccgagaccatccgcctcgag
cagaactaccgctccaccgccaacatcctgaaagcggccaactgcgtcatcgccaacaac
gccgagcgccttggcaaggagctgtggaccgagggcgccgagggcgagccgatttcgctc
tacgccgccttcaacgaggtggacgaggcacgcttcgtggtcggccgcctcaaggactgg
aaagagaagggcggcctcttggccgactgcgccatcctctatcgctccaacgcccagtcg
cgggtgctggaagaggcgctgatgcaggacgccatgccctatcgcatctacggcggcctg
cgcttcttcgagcggcaagagatcaaagacgccatggcctacctgcgcctcatcaacaac
cggggcgacgacgccagcttcgagcgggtggtcaacaccccgacccgcggcatcggcgat
cgcaccctcgagatcctgcggagcaacgcccgcgatcagggccagaacctgtggcaatcg
gccaaggcgctgctcaatgacaaggtgctgaccggccgcgccggcaatgcggtgcgcggc
tttgtggagctgatcgacgcgctggaggagctggtctccctgctgccgctgcatcagcag
gcggatatcgccatccagcactccggcctcaaggcgatgtatctggcggaaaaaggcgag
aaatcccaggcgcgggtagagaacctggacgaattggtcaccgcctgccgccagtaccag
cgcccggacgagctggaagacatgagcgatctctccgccttcctcgcccacgcggcactg
gaatccggcgagaatcaggcggacgaatatgccgatgcggtgcagctgatgacattgcac
agcgccaaggggctggagttcccgctggtgctgctggtcggcgtcgaagagggcatgttc
cccagccagcaatccaccgaggagtcgggccggctggaagaggagcgccgcctctgttac
gtgggcatgacccgcgcaatggagaagctctacatctgttatgcggagagccgccgcatc
tatggccgcgagatgttccacaagccgagccgctttatccgcgagatgcccgccgagtgt
ctggaagagatccgtctgcgcacccaggtcagccgccccacccagtacggccgctttagc
cagaatgaggtgcagcagagcttcgacgccagcggcatcaagctgggccagcgggtgctc
catccgaaatttggggaaggcatagtgctcaacttcgaaggggtcggccagcagagccgg
gtgcagatccagttcgacgacgtcggcgccaagtggctggtgacggcgtatgcgagattg
gaggcgctctaa
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