KEGG   Aeromonas hydrophila YL17: AI20_19035
Entry
AI20_19035        CDS       T03186                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
ahd  Aeromonas hydrophila YL17
Pathway
ahd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ahd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AI20_19035 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ahd03021]
    AI20_19035 (rho)
   03019 Messenger RNA biogenesis [BR:ahd03019]
    AI20_19035 (rho)
Transcription machinery [BR:ahd03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     AI20_19035 (rho)
Messenger RNA biogenesis [BR:ahd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AI20_19035 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_22 OB_RNB AAA_25 S1CSD-TOTE-2 AAA Mor FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: AHV37190
LinkDB
Position
1205796..1207061
AA seq 421 aa
MNLTELKNTPVSELVQLGESMGLENLARAHKKDIIFAILKAHAKGGEDIFGDGVLEILTD
GFGFLRSADGSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDRPENSRNKILFENLTPLHANERLRMERGNGSTEDITARVLDLASPIGKGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCELIVLLIDERPEEVTEMQRMVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVYPAIDI
TRSGTRKEELLTTGDELQKMWILRKIVHPMGEIDGIEFLIDKLAMTKTNDEFFDAMRRQQ
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatctgactgaattaaagaacactcctgtgtccgagctggtacagcttggcgaatcc
atggggttggaaaatctggctcgggcgcacaagaaagacattattttcgcgattctcaag
gcacacgccaagggtggcgaggatatcttcggcgacggtgtgctggaaatcctgaccgat
ggtttcggcttcctgcgtagtgcagacggctcctacctggccggcccggacgacatctac
gtctccccgagccagatccgccgtttcaacctgcgcaccggcgataccatctccggcaag
atccggccgccgaaagagggcgaacgctacttcgctctgctcaaggtcaacgaggtcaac
tacgaccgtccggaaaactcccgcaacaagatcctgtttgaaaacctcactccgctgcac
gccaacgagcgtctgcgcatggagcgtggcaacggttccaccgaagacatcaccgcccgc
gtactggatctggcgtccccgatcggtaaaggccagcgcggtctcatcgtcgcaccgccc
aaggccggtaagaccatgctgctgcagaacatcgcccagagcatcgcctacaaccacccc
gactgcgaactgatcgtcctgctgatcgacgagcgtccggaagaggtgaccgagatgcag
cggatggtgaagggcgaagtgatcgcctccaccttcgacgagccggcttcccgtcacgtc
caggtcgccgaaatggtgatcgagaaggccaagcgtctggtcgagcacaagaaggacgtg
gtgatcctgctggactccatcacccgtctggcccgtgcctacaacactgtcatcccgtca
tccggcaaggtactgaccggtggtgtggacgccaacgccctgcaccgtccgaagcgcttc
ttcggtgccgcgcgcaatgttgaagagggcggcagcctgaccatcatcgccaccgcgctg
atcgataccggctccaagatggatgaagtcatctacgaagagttcaagggcaccggcaac
atggaactgcacctctcgcgcaagatcgccgagaagcgcgtctacccggccatcgacatc
acccgttccggtacccgcaaggaagagctgctgaccaccggcgacgagctgcagaagatg
tggatcctgcgcaagattgtccacccgatgggcgagatcgacggcatcgagttcctcatc
gacaagctggcgatgaccaagaccaacgacgagttcttcgacgccatgcggcgccagcag
aagtaa

DBGET integrated database retrieval system