Aeromonas hydrophila YL17: AI20_20675
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Entry
AI20_20675 CDS
T03186
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ahd
Aeromonas hydrophila YL17
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ahd03009
]
AI20_20675 (rluD)
Enzymes [BR:
ahd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
AI20_20675 (rluD)
Ribosome biogenesis [BR:
ahd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AI20_20675 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
MalQ_N
S4_2
Motif
Other DBs
NCBI-ProteinID:
AHV37486
LinkDB
All DBs
Position
complement(844945..845925)
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AA seq
326 aa
AA seq
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MSQHIELTGEFQDHQFGQRLDQALAELFPDYSRTRIKEWILQDRVTLDGQVANTPREKVL
AGQKVHVDVELEDDTRFDAQDIELNIVYEDEHILVIDKPAGLVVHPGAGTPDGTILNALL
HRYPDIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTHLVEALQARQITREYEAIAIGHMT
AGGTVDAPIGRHPTQRTHMAVVPNGRPSVTHYRVHEKFRGHTRLRLRLETGRTHQIRVHM
AHIKHPLVGDPAYGGRLRPLRNAIPELTEALRNFHRQALHATMLQLAHPITGEVMQWHSP
TPQDMLDLMEVLRADTLANPDDLVWN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcatattgaactgacaggcgaattccaggatcaccaattcgggcagcgactc
gaccaggccctggccgaattgtttccagactactcccgcacccgcatcaaggagtggatt
ttacaggacagagtgaccctggatggtcaggttgccaataccccgcgcgagaaggtgctg
gccgggcagaaggtacatgtggatgtcgagctggaagatgacacccgcttcgatgcgcag
gatatcgagctcaacatcgtttacgaagatgaacacattctggtgatcgacaagccggcc
ggtctggtggttcacccgggcgccggtacgcccgatggcaccatcctcaacgccctgctg
caccgctacccggacatcgccgaagtgccccgcgccggtatcgtgcaccgtctggataaa
gacaccacgggtctgatggtggtcgccaagacagtgccggcccagacccatctggtggaa
gcgctgcaggcgcgccagatcacccgtgagtacgaagcgatcgccatcggtcacatgacc
gccggcggcaccgtcgatgcccccatcggccgtcacccgacccagcgcacccacatggcc
gtggtgcccaatggccgtccttccgtgacccactaccgggtgcacgagaagttccgcggt
cacacccggctgcggttgcggctggaaaccggtcgtacccaccagatccgcgtgcacatg
gcccacatcaagcacccgctggtgggtgatccggcctacggcggtcgtctgcgtccgctg
cgcaacgccatccccgagctgaccgaagccctgcgcaacttccatcgccaggcgctgcac
gccaccatgctgcagctggcgcaccccatcaccggtgaggtgatgcagtggcattcgccg
acgccgcaggacatgctggatctgatggaagtgctgcgggccgataccctggccaatccg
gacgatctggtctggaactga
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