Arcanobacterium haemolyticum: Arch_0835
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Entry
Arch_0835 CDS
T01242
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ahe
Arcanobacterium haemolyticum
Pathway
ahe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Arch_0835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahe03019
]
Arch_0835
03009 Ribosome biogenesis [BR:
ahe03009
]
Arch_0835
Enzymes [BR:
ahe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Arch_0835
Messenger RNA biogenesis [BR:
ahe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Arch_0835
Ribosome biogenesis [BR:
ahe03009
]
Prokaryotic type
rRNA helicases
Arch_0835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
adh_short
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ADH92561
UniProt:
D7BNR2
LinkDB
All DBs
Position
complement(945882..947744)
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AA seq
620 aa
AA seq
DB search
MANATTFADLNLPETILSAVTDLGFTSPTAIQEQAIPLLLEGRDVLGVAQTGTGKTAAFA
LPMLAHVDPNNRHVQALVLAPTRELALQGAEAINTFAARTGGLDVVAVYGGSAYGPQLGA
LRDGAQVVVGTPGRVMDMIDRGALDLSTIRYFVLDEADEMLRMGFAEDVEKIATGLPEER
ISALFSATMPKQIRMVAETHLNNPAEVQVSSPSSTVDTITQTYAVVPTRHKIGALARVLA
TTEADAALVFVRTRATAEDLAIELSTRGVQAAALSGDVAQKDREKLVDRLRQGSIDVLVA
TDVAARGLDVERIGLVVNFDIPREVETYVHRIGRTGRAGREGTALSFVTPKEKQRLRRIE
KVTRTQMTQVELPTPAEVSGLRARKLLAEAVERHAVGRLHVYDDLIAEFIAAQEDAQNDG
MELLSLADLVSALLALGVRDPGPQATDEPEKLTVGFTADDDRREKRGRREDRGGQRRGGF
DEPGTTYRVEVGRRDGVAPGAIVGAMTNEGGLRGSQLGKIDIFPSFSLIHVNDELDQATL
RRIAKARVSGRTLDITKDNGPRGGRRPSEAHADDSGLRKYRADRKFGEERAQRRQTHSNR
RGSFKKSYRKDNRRSFRDSY
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgccactacttttgctgatcttaatttgccagaaactattctttcggctgtt
actgatcttgggttcacatcaccaactgctattcaagaacaggctattccgctgttgctt
gaggggcgtgacgtgctcggcgtcgcacaaaccggcaccggtaaaactgccgctttcgcg
cttccaatgctggcacacgtcgatcctaacaatcgccacgtgcaagctctcgtgctcgca
ccaacccgcgaactagcgctccagggcgcagaagcaatcaatacgtttgctgcgcgtacc
ggtggactcgacgtcgtcgctgtctacggcggttccgcatacggtccgcaactcggtgcg
cttcgtgatggtgcgcaagtcgtcgtcggtactccaggccgcgtgatggatatgatcgat
cgtggcgcgctcgatctgtccacaattcgctacttcgtgttggacgaagccgatgagatg
cttcgtatgggcttcgcagaggacgtcgaaaagattgcaaccggccttccagaagaacgc
atctctgccctcttctccgcaactatgccaaagcaaatccgcatggttgcagaaactcac
ttgaataatcctgctgaagtgcaggtatcatcaccaagctccactgttgatacgatcact
cagacgtacgcggttgtgccaacccgtcacaagatcggcgcgcttgctcgcgtcttggct
accacggaagctgacgctgcgctcgtgttcgtccgtacccgtgcaacggctgaagatctc
gcaatcgaactgtctacccgcggcgttcaagctgctgcgctttctggcgacgtggcacaa
aaagatcgtgagaaactggttgatcgtttgcgtcaaggttcgattgacgtgctcgtggca
acagacgttgcggcgcgtggactcgacgtcgaacgtatcggccttgttgtcaacttcgat
attccacgcgaagtcgaaacctacgtccaccgcatcggccgtacgggccgtgcaggccgt
gaaggtaccgcactttcgttcgtcaccccgaaggaaaagcagcgcttgcgccgcatcgaa
aaagttactcgcacgcagatgacccaggtggaactcccaactccagccgaagtttctggc
ctgcgtgcccgcaaacttcttgctgaagcagtagaacgccacgcagttggccgcctccat
gtgtacgatgatctgatcgcagaattcatcgcagcacaagaagatgcccaaaacgatggc
atggaattgttgagcctggcagatcttgtttctgctctcttggcgctgggcgttcgcgat
ccgggcccgcaggcaactgacgaacctgaaaagcttactgttggctttactgcggacgat
gaccgccgtgaaaagcgtggccgccgtgaagaccgcggtgggcagcgccgtggcgggttc
gacgaacctggcaccacataccgtgttgaagttggccgccgtgacggcgtggctccaggc
gcaatcgttggcgcaatgacgaacgaaggtggacttcgtggttcccagctgggcaagatt
gatatcttcccatcgttctcactcattcacgttaatgatgaactcgatcaggcaacgctt
cgtcgaatcgctaaggcacgcgtatctggccgcacgttagatatcactaaggataatgga
cctcgtggtggccgccgtccatcggaagcccatgcagacgattccggtttgcgcaagtac
cgtgccgatcgtaagttcggtgaagagcgcgcacaacgccgccaaacgcattccaaccgc
cgtggttcgttcaagaagagctaccgtaaggacaatcgccgttcattccgcgattcatac
tga
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