Arcanobacterium haemolyticum: Arch_1072
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Entry
Arch_1072 CDS
T01242
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ahe
Arcanobacterium haemolyticum
Pathway
ahe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Arch_1072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahe03019
]
Arch_1072
03009 Ribosome biogenesis [BR:
ahe03009
]
Arch_1072
Enzymes [BR:
ahe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Arch_1072
Messenger RNA biogenesis [BR:
ahe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Arch_1072
Ribosome biogenesis [BR:
ahe03009
]
Prokaryotic type
rRNA processing factors
Arch_1072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
ADH92786
UniProt:
D7BPD7
LinkDB
All DBs
Position
complement(1206433..1208952)
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AA seq
839 aa
AA seq
DB search
MDVVLPEGKKATRTRKSSAKKAVSKDVSESVAESLAELAKTPRKKSVASKATVAPMDPTS
IVFSAGDTNHAAPVPEVTPAAPMISLLFQEPDVARAVRARKKRKEDVEETADVQQEPAAE
SHDDSEASADSSRKRRRGTRGGRGKAEEAQVDSNAEAENKDAVQEESEPVRKVKKTKAVV
EDSEQPELEAEEPAVRRRRRRRSSENTSDEVTAPKGSTRLEAKRQRRKEGREAGRRRQTI
TESEYLARRESVERDMLIRERDGLNQIAVIEDGVLVEHYVARHTQASMVGNVYLGRVQNV
LPSMEAAFVDIGKGRNAVLYAGEVNWDATGLEGKPRKIEQALKSGDPVLVQVTKDPIGHK
GARLTAQITLAGRHLVLVPGGAMTGISRKLPERERTRLKKILKEVVPAEHGVIVRTAAEG
ATEEQLKQDVERLMKSWADIEAKSKSSKNAPSLLKGEPELAVRVVRDIFNEDFRTLRISG
DNAWETISHYVSDLSPELIDRLEKWDSNADIFQENRVDEQLQKAFDRKVFLPSGGSLVID
RTEAMTVIDVNTGKFTGSGGSLEETVTRNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLE
ANRDLVLRRLIECLGRDRTRHQVAEVTSLGLVQMTRKRVGQGLVEAFSTTCECCEGRGYI
SHDHPVERDEEKPARQTSKKEAKKKDAAKNTAESDSKHEEVKAALASIAAAATTKHEEMA
AEGGAPDADSADVPAAEKAVEKASEDAQADRPKRGRPRKKKTSDRSDTHESESAERDTPK
KRGRKRATSADAAQPDSAEKPREKSETPVKKTKKRVTSSGTITPTQRASSAIMSFPVKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgttttgccggaaggtaagaaggcaacacgtacacgtaaatcgtccgctaag
aaagcagtttcaaaggacgtttctgaatcggtagctgaatcgcttgctgagttggctaag
actcctcgcaagaaatctgtagcgtctaaggctacggtggctccgatggatccaacctcg
atcgtcttttcggcgggggatacaaatcatgcggcaccggtgcctgaggtaactccggct
gcgcctatgatttctcttctattccaggaacctgacgttgctcgggcagtgcgtgctcgt
aagaagcgcaaggaagatgttgaagaaactgctgatgtgcagcaggagccggcggcagaa
tctcacgatgattctgaagcgtctgccgattcctcccgtaagcgccgccgcggtacccgc
ggcgggcgcggtaaggcagaggaagctcaggtagattcgaacgctgaggctgagaacaaa
gatgcggttcaggaagaatctgagcctgttcgtaaggtgaagaaaacaaaagccgttgtg
gaagattccgaacagccagagttggaggcagaagagcctgctgttcggcgtcggcgccgt
cgtcgttcttctgaaaatacctcggatgaagtaacggcaccaaaaggttcaacgcgcctc
gaagcgaagcgtcaacgccgcaaggaagggcgtgaagcgggccgtcggcgccaaaccatc
actgaatcggaatacttggcacggcgcgaatctgttgaacgtgacatgctgatccgggaa
cgtgacggactcaaccaaatcgccgtaatcgaagatggcgtgctggtggaacactacgtg
gcgcgtcatacgcaagcgtccatggttggaaacgtctatcttggccgcgtacaaaacgtc
cttccatcaatggaagctgcgttcgtggatatcggcaaaggccgcaacgcagttctctac
gctggcgaagtgaactgggatgcaactggactcgaaggaaagccacgtaaaattgagcaa
gcactcaagtctggtgatccggtactcgtccaggtaaccaaggatccaatcggccacaag
ggtgcccgcctcactgcgcaaatcaccctcgcagggcgccacctggtactcgtgccaggc
ggagcaatgaccggtatttcccgcaaactccccgaacgtgaacgtacccgcttgaagaag
atcctcaaggaagttgtgccagcagaacacggcgtgatcgttcgaaccgcagccgaaggc
gcaacggaagaacaactcaaacaagacgtggaacgcctcatgaaatcgtgggcggatatc
gaagcaaaatcgaaatcgtctaaaaatgctccatcgctcctcaaaggcgaaccggaactc
gctgtgcgcgtggtacgtgacatcttcaatgaagatttccgcaccttgcgaatctctggt
gacaatgcgtgggaaaccatctcccattacgtttcggatctttctccagaactcattgat
cgcctcgaaaagtgggattcaaacgcagatatcttccaggaaaaccgcgtagatgaacaa
ctccaaaaggcattcgatcgcaaggtgttcctgccatctggcggctcgctggttatcgat
cgtaccgaggctatgactgtcattgacgtcaacacaggtaaattcaccggatctggtggt
tcactggaagaaaccgtgacccgcaacaacctggaagccgccgaagaaatcgtgcgccaa
ctccggttgcgcgatattggcggaatcatcgttgttgacttcatcgatatggtgttggaa
gctaaccgcgatctcgtgttacgccgcctcatcgaatgcttagggcgcgatcgtacccgc
caccaggttgctgaagtgacttctctaggcctcgttcaaatgactcgcaaacgagtaggg
caaggcctcgttgaagccttctccaccacctgtgaatgctgtgaagggcgtggctacatc
agccacgatcatcccgtagaacgggacgaagaaaagcctgcgcgccaaacctccaagaag
gaagctaagaagaaggacgctgctaagaacacggcagaatctgattcgaagcatgaagaa
gtgaaagctgcccttgcctccattgcagcggctgcaactacgaagcatgaagaaatggcg
gcagaaggtggtgcacctgacgcggatagtgctgacgtgccagcggcggagaaggctgtg
gagaaggcctcagaggacgcgcaggcggaccgcccgaagcgcggccgcccgcgaaagaag
aagacttctgatcgatctgacactcatgaatcagaatcggcagagcgtgacacgcccaaa
aagcgtggccgtaaacgtgcaacatcggctgatgcggcacaacctgatagtgcagaaaaa
ccgcgtgaaaagagtgaaactcccgtgaaaaagacgaagaaacgcgtcacttcatctggt
acaatcactccaacacagcgtgcatcttcagctatcatgagcttcccggtaaagaaataa
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