Arcanobacterium haemolyticum: Arch_1395
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Entry
Arch_1395 CDS
T01242
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ahe
Arcanobacterium haemolyticum
Pathway
ahe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ahe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Arch_1395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahe03021
]
Arch_1395
03400 DNA repair and recombination proteins [BR:
ahe03400
]
Arch_1395
Enzymes [BR:
ahe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Arch_1395
Transcription machinery [BR:
ahe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Arch_1395
DNA repair and recombination proteins [BR:
ahe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Arch_1395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ADH93097
UniProt:
D7BKB7
LinkDB
All DBs
Position
complement(1524478..1528455)
Genome browser
AA seq
1325 aa
AA seq
DB search
MLDVNLFDQLHISLATSEDVRKWSHGTVTKPETINYRTLKPEKDGLFGEQIFGPTRDWEC
ACGKYKRPRYKGIVCERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMVTDVDAERRHNDLPALTAEYEMERANLQKECDAAVEKRLKAEEAA
LAEAEKNGQDAAARAKIKRNAESEARRVRREYEDDIARLEEVWDKFTKLKVGDLEGDEDA
YREMVLRWGDYFQAFRGAEAIQRRLKSFDLEAEHEALVEQIETGTAQRKTRALKRIKVVN
AFLHSGTAPEAMVLDALPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLQRMIDL
NAPEIMVNNEKRMLQEAVDALFDNGRRGRPVQGAGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPTLKLHQCGLPKTMALELFKPFVQKRLVDLELAKNIKAAKRLIERQR
DEVFDVLEEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIRLHPLVCSAFNADFDGDQ
MAVHLPLSVEAQAEARILMLSANNILKPSDGRPVTVPAQDMIIGLYHLTVVRDGGDGEGR
YFSSVAEAQMAFDLGQLDLNSMINLRFPANDIVPPREWEAPEGYEEGDSIILKTTLGRAI
FNEALPTTFPFINKVVGKKVLGTVINELAERYPKVDVGASLDALKETGFYWGGRSGVTIA
VSDVIPPETKKDILAAAEKRAAKIEQDFQEGNIRDEDRRKDLVALWTEVTDEVAEEMRKN
FDDWNNVNIMVTSGARGNWMQIRQVAGMRGLVADPKGEIIPRPITSNYREGLSALEYFTA
THGARKGLADTALRTAESGYLTRRLVDVAQDVIVREHDCGTSRGLSKFIVAVDKEGNELR
EVLVDGVPTTVTEKEVSAAQWESGKVLPNEELDTSVYARTLAKDVADADGNILVEAGTDM
GDVALEKLLAAGIKQISVRSVLTCNSRVGTCAMCYGRSLATGKLVDIGEAVGIVSAQSIG
EPGTQLTMRTFHTGGAASAEDITQGLPRVQELFEARTPKGEAPLVEAAGKLEIEDLERSR
RLIIKRDDGDEDLVYLVGKRAKLLVPEGSHVTVGQQLVEGLIDPKKVLRISGRRTTQLHL
VSEVQHVYRSQGVEIHDKHIEVIVRQMLRRVTVLDSGDTRLLPGELVDVSVFESANRAVL
AEGGRPASGRPELMGITKASLATDSWLSAASFQETTKVLTEAALNSKSDPLAGLKENVIL
GKLIPAGTGLESLRQLRVEPTAEARSEYEQLNSFMGSGMESFDDFYGYGSFDDYDTSGFG
FGSNF
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaatctttttgatcagctccacatttcgctggccacgtcggaagatgtg
cgcaagtggagccacggcaccgtcaccaagccggaaaccattaactaccgcacattgaag
ccggaaaaagacggtctgtttggtgaacagatcttcggcccaacccgtgactgggaatgt
gcatgtggtaagtacaagcgcccacgctacaagggcatcgtttgtgaacgttgtggtgtt
gaagtcacccgttccaaggtgcgccgcgaacgtatggggcacattgaacttgctgcgcct
gtcacccacatttggtatttcaagggtgttccatcacgccttggctacctgcttgatatt
gctccaaaggatctggaaaaggtcatctacttcgccgcctacatggtgaccgatgttgat
gcagagcgccgccacaacgatctcccagccctcacggctgaatacgagatggagcgcgcc
aaccttcagaaggaatgcgatgctgctgttgagaagcgtttgaaggctgaagaagccgct
cttgcagaagcagagaagaacggtcaagacgctgctgcccgcgctaagatcaagcgcaac
gcagaaagcgaagcacgccgtgttcgccgtgaatatgaagacgacatcgcccgcctcgaa
gaggtctgggataagttcaccaagctcaaggttggcgatcttgaaggtgacgaagatgca
taccgtgaaatggttcttcgctggggcgattacttccaggctttccgtggtgcggaagca
attcagcgccgcctgaagtcgttcgatttggaagcagagcacgaagctcttgttgaacag
atcgaaaccggcaccgcccagcgtaagactcgcgccctcaagcgcatcaaggttgtgaac
gcattcctgcattctggcaccgcgccagaagcaatggtgttggacgcgcttccagtgatc
ccaccggatctacgcccaatggttcagctcgatggtggccgtttcgctacctccgatttg
aacgatctctaccgccgcgttatcaaccgtaacaaccgcctccagcgcatgatcgatctc
aacgcgcctgagatcatggtgaacaacgaaaagcgtatgcttcaggaagctgttgacgcg
ctgttcgataacggccgccgtggccgcccagttcagggcgccggcaaccgtccgctgaag
tcgatctctgacatgctcaagggtaagcagggtcgtttccgtcagaacttgctcggtaag
cgtgttgactactcgggtcgttccgttatcgtcgtcggcccaactctgaagctgcaccag
tgtggtcttccaaagaccatggctctggaactcttcaagccattcgtgcagaagcgtttg
gtggatcttgaactcgccaagaacatcaaggctgcaaagcgtctgatcgaacgtcagcgc
gatgaggtcttcgacgttctcgaagaggtcattcgtgaacatccagttctgctcaaccgt
gcaccaaccctccaccgcctcggtattcaggcgttcgaaccacagctcatcgaaggtaag
gcaatccgcctccacccactcgtgtgttccgcgttcaacgctgacttcgacggcgatcag
atggcagtccatctgccactatcggttgaagcacaggcagaagcacgtatcctcatgctt
tcggcaaacaacatcctcaagccatcggacggccgcccagtgactgttccggcacaggat
atgattatcggtctgtaccacttgaccgttgttcgtgatggtggcgatggcgaaggccgt
tacttctcatcggttgctgaagcgcagatggcgttcgatttgggccagttggatcttaac
tccatgattaacctccgcttcccagcgaacgatatcgtcccgccacgtgagtgggaagct
ccagaaggttacgaggaaggcgattcgatcatcctcaagacaaccctgggccgtgcgatc
ttcaacgaagccctcccaaccaccttcccgttcatcaacaaggttgtgggcaagaaggtt
cttggcacggttattaacgaacttgctgagcgttacccgaaggtcgacgtcggcgcctcg
cttgacgccctgaaggaaaccggtttctactggggcggacgttccggtgtgactattgcg
gtttcggacgttattccgccagaaaccaagaaggatatccttgcggctgctgaaaagcgc
gctgcgaagatcgaacaggacttccaagaaggtaacatccgtgacgaagatcgccgtaag
gatctggttgctctctggactgaagttactgacgaagtcgcagaagaaatgcgtaagaac
ttcgatgactggaacaacgtgaacatcatggttacctcgggtgctcgtggtaactggatg
cagattcgccaggttgctggtatgcgtggtctcgtggctgatccaaagggtgaaattatt
cctcgcccgatcacgtcgaactaccgtgaaggcctgtccgctctggaatacttcacggca
acccacggtgctcgtaagggtcttgctgatacggcgttgcgtacggcagaatctggttat
ttgacgcgtcgtctggttgacgttgcacaggacgtgatcgttcgcgaacacgattgtggt
acgtcgcgcggcttgtccaagttcattgttgcagtggataaggaaggcaatgaactccgt
gaggtgctcgttgatggcgttccaaccaccgtaacagagaaggaagtttccgcagcccag
tgggagtctggtaaggttcttccgaacgaagaattggatacctcggtttacgctcgtact
ttggcgaaggatgttgccgacgccgatggcaacattcttgttgaagcgggcaccgatatg
ggtgatgttgcgcttgagaagcttcttgctgctggcattaaacagatttcggttcgttcc
gttcttacctgtaattcccgcgttggtacctgtgcgatgtgttatggccgttcgttggca
acgggcaagctcgttgacatcggcgaagcggttggtatcgtgtcagcacagtccattggt
gaaccgggtactcagctgacgatgcgtacgttccacactggtggtgcggcatcggcagaa
gatattacccagggtctgccgcgtgttcaggaactgttcgaagcacgtacgcctaagggt
gaggctccgctcgttgaggcagccggtaagctggagatcgaagatctcgaacgttcccgc
cgcctgatcatcaagcgtgatgacggcgatgaggatctagtttacttggtgggcaagcgt
gccaagcttttggttccagaaggttcgcacgtgacagtcggccagcagctggttgaaggc
ctgatcgatcctaagaaggttcttcgtatctcgggccgccgtaccacgcagttgcacttg
gtttctgaagttcagcacgtttaccgttcgcagggtgttgagattcacgataagcatatt
gaagttatcgtgcgtcagatgctccgccgggtcacggttttggattcgggcgatactcgc
ttgttgcctggtgaacttgtggatgtttcggtgtttgaatctgcaaaccgtgcagttttg
gctgaaggcggccgtccagcatctggccgtccagagctgatgggtatcactaaggcatcg
ttggcaacggattcgtggctgtctgcggcatcgttccaggagacaaccaaggttctgaca
gaagcggcgttgaactctaagtccgatccacttgcgggcctgaaggaaaatgttatcctc
ggtaagctcatcccagctggtaccggccttgagtcgctacgccagcttcgtgttgagcca
actgcggaagcacgttccgaatacgaacagctcaactcgttcatgggctccggtatggaa
tcgtttgatgatttctacgggtacggttcgttcgacgattacgatacatcgggtttcggg
ttcggatctaacttctga
DBGET
integrated database retrieval system
