Allofrancisella heilbronnii: FRA_01615
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Entry
FRA_01615 CDS
T11857
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ahei Allofrancisella heilbronnii
Pathway
ahei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRA_01615 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahei03021
]
FRA_01615 (rho)
03019 Messenger RNA biogenesis [BR:
ahei03019
]
FRA_01615 (rho)
Transcription machinery [BR:
ahei03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FRA_01615 (rho)
Messenger RNA biogenesis [BR:
ahei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FRA_01615 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA
ResIII
S1CSD-TOTE-2
Mor
AAA_22
DUF3086
Motif
Other DBs
NCBI-ProteinID:
YDC61303
LinkDB
All DBs
Position
complement(350637..351899)
Genome browser
AA seq
420 aa
AA seq
DB search
MNLNELKYKSVNELMDIAQSLDLESLRARKQELIFSILKYHADNGEDIYGEGILEVLQDG
YGFLRSSDSSYFASPDDIYVSPAFIRKLNLRTGDSIVGKIRPPRDSEKYFAVKHIDSVNF
DSPELARKKILFENLTPEYAKERLTMEIGNGSSEDLTARVIDLAAPFGKGQRGLIVAPPK
TGKTIMMQNIATSIAKNHPECNLIMLLIDERPEEVTEMQRSVRGEVVASTFDEPAARHVQ
LAEIVIEKAKRLVEHKQDVVILLDSITRLARAYNTVSPASGRVLSGGVEANALQKPKRFF
GAARNTAEGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELHLDRKIAERRVYPAISFD
RSGTRREELLTTPEELQKLWILRKILGGMEDVQAMEFLTEKMKGTLTNEEFFETMKRGTI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaatgaattaaagtataaatctgtaaacgagctaatggatatagctcaaagc
ttagatcttgagtcactacgtgcaagaaaacaagaacttattttctctatcttaaaatac
catgctgataatggcgaggacatttatggtgaaggtattcttgaagttttacaagacggt
tatggttttttaagatcttctgatagctcatactttgccagtccagatgatatttatgta
tcacctgcttttattagaaaactaaacctacgcactggtgatagtattgttggtaaaatt
cgacctcctcgtgatagcgaaaaatactttgctgttaaacacatcgatagtgttaatttt
gattctcctgaacttgctagaaaaaagattctttttgaaaacttaacgccagagtatgct
aaagaaaggctaaccatggagatcggcaacggttctagtgaagatctcacagccagggtt
atagatttagcagccccattcggtaaaggtcaacgtggtttgattgtggcaccacctaaa
actggtaaaacaattatgatgcaaaatatcgcaacctcaattgctaaaaaccatcctgaa
tgtaacttaattatgcttttaattgatgaacgccctgaagaagtaactgaaatgcaacgt
tcagtacgtggtgaagttgtagctagtactttcgatgagcctgctgcacgccacgttcaa
ttagctgaaattgtgatagaaaaagctaaaagactagtcgagcataaacaagatgttgta
atcctactagactctatcacaaggcttgcacgtgcttataacactgtatcaccagcatct
ggtcgtgtgctatctggtggtgttgaagcaaacgctttacaaaagccaaaaagattcttt
ggtgctgctcgtaacactgctgaaggtggtagcctaacaatcattgctacagcccttgta
gaaacaggttctaagatggacgaggttattttcgaggagttcaaaggtactggtaacatg
gagctacaccttgatcgtaagattgctgagcgtcgcgtgtatcctgcgattagctttgat
aggtctggtacgcgtagagaagagctacttactactccagaagaattgcagaagctttgg
attttacgtaagattcttggtggtatggaagatgttcaagctatggaatttttgactgaa
aaaatgaaaggcacattaacaaatgaagagttctttgagactatgaagagagggactatt
taa
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