Allofrancisella heilbronnii: FRA_02790
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Entry
FRA_02790 CDS
T11857
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ahei Allofrancisella heilbronnii
Pathway
ahei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FRA_02790 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahei03400
]
FRA_02790 (uvrB)
DNA repair and recombination proteins [BR:
ahei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FRA_02790 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FRA_02790 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
Kinesin
AAA_30
Microtub_bd
AAA_22
AAA_7
DUF87
Motif
Other DBs
NCBI-ProteinID:
YDC61520
LinkDB
All DBs
Position
600041..602047
Genome browser
AA seq
668 aa
AA seq
DB search
MAKFNLVTKYSPSGDQPKAIKSLVEGVNNGLQHQVLLGVTGSGKTYTMANVINQTQKPCL
ILAHNKTLAAQLYSEMKQYFPDSAVEYFVSYYDYYQPEAYVAASDTYIEKDSSVNEHIEQ
MRLSATKAILERSDVIIVATVSAIYGLGDPEQYMQMLLHLKVGETLDIKKAQTKLVEMQY
SRNDMDFSRGSFRVRGEILDIFPADSEKDAIRVEFFDDEIEAISIIDSLTSKKIKPLHRA
TIFPSTHYVASKERKDIVIEEIKKELKERVKYFEQEGKLLEAQRIEQRTKYDIEMIQELG
YCTGIENYSRLLSGRDPGDPPPTLLDYLPENALVIVDESHVTLPQFGGMQKGDFSRKSNL
VNYGFRLPSALDNRPLKFNEFEKLLPQTIYVSATPATYELERSQNTVEQVIRPTGLLDPE
VFVRPVAIQVEDALSEINKAVASNERVLITTLTKKMAENLTEYLSEHNVNVRYLHSDIDT
VERVQIIHDLRQGIFDVLVGINLLREGLDMPEVGILLIFDADKEGFLRSEKSLIQTIGRV
ARNENGRAILYADIVTKSMKKAMDETLRRRKLQDEYNKKNNIIPRTIIKNIDDMLDSSPE
RQKREYKNNSRISVDDVDVSAILGITEASKIIKALEKRMKAHAKELEFEQATLIRDKILK
IKQRFIEL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtttaatttagttactaaatatagccccagtggagatcagcccaaagcaatt
aagtcgctagttgagggtgttaataatggtttacagcatcaagttttacttggtgtaaca
ggctctggtaaaacttatactatggcaaatgtaattaatcaaacacagaaaccatgtcta
attttagctcataataaaactttagctgcacaactatattcagagatgaaacaatatttt
ccagatagtgccgttgagtattttgtctcatactatgattattaccaaccagaagcatat
gttgctgcatcagatacatatattgaaaaagactcttctgtaaatgagcatattgaacaa
atgcgcttatccgcaactaaagctatattagagcgtagcgatgtaattatagttgctaca
gtgtctgcaatttatggtttaggcgatcctgaacaatacatgcaaatgcttttgcactta
aaggttggtgaaactttggatataaaaaaggcacaaactaaattggtagaaatgcaatat
tcgcgtaatgatatggactttagtcgaggtagctttcgtgtgcgtggtgagatactagat
atttttccagcagattctgaaaaagatgctatccgagtagaattttttgatgatgagata
gaagcaataagtataatagactctttaacctcaaaaaaaattaaacctttacatagagca
acaatatttccaagtactcactatgtggcttcaaaagagcgtaaagatatagttatagaa
gaaattaaaaaagaattaaaagaaagagttaaatattttgaacaagagggtaaattactt
gaagctcaaaggatagagcaaagaacaaaatatgatatcgagatgattcaagagctaggc
tactgtactggtattgaaaattattctagattgctatctggacgtgatccaggagacccg
ccgccaacacttttggactatttaccagaaaatgctcttgtaatagttgatgagtctcac
gtgacattgccacagtttggaggtatgcaaaaaggtgatttttcacgtaagtcaaactta
gtaaattatggttttaggcttccatcagcgttggataatcgcccactaaaatttaatgag
tttgagaaactacttccacaaacaatttatgtatcagcaacgccagcaacttatgagtta
gagagatctcaaaatacagttgagcaagtgattcgtccaacaggactgttagatccggaa
gtttttgtacgaccagtggcaattcaagttgaagatgctttatctgagataaataaggct
gtagctagtaatgaaagagttttgataactacattgactaaaaaaatggcagagaatttg
acagagtatttgtcagaacataacgtcaatgtgaggtatttgcattcagatattgatact
gtggagcgggtgcaaattatccatgatttacgtcaagggatatttgatgtgctagtaggt
attaatcttttaagagaaggattagatatgcctgaagttggtatattacttatttttgat
gctgataaagaaggatttttacgttcagaaaagtctcttatacaaaccataggtagagtt
gcaagaaatgaaaatggtcgagcaatactatatgcagacattgtaactaagtctatgaaa
aaggctatggatgaaacgttacgtagacgtaagctacaagatgagtataataaaaagaac
aacattatccctagaacgatcataaaaaatatagatgatatgttagatagctctccagaa
aggcagaagcgagaatataaaaataacagcaggataagtgttgatgatgttgatgtttcg
gctatactaggtataactgaagctagtaaaattataaaagctttagaaaaacgtatgaaa
gctcatgcaaaagagcttgagtttgagcaggctactttaattagagacaaaatacttaaa
ataaagcagagatttatagagttatga
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