Aureliella helgolandensis: Q31a_24340
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Entry
Q31a_24340 CDS
T06948
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ahel
Aureliella helgolandensis
Pathway
ahel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q31a_24340 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahel03019
]
Q31a_24340 (rny)
Messenger RNA biogenesis [BR:
ahel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Q31a_24340 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
YtxH
KH_KhpA-B
KH-I_KHDC4-BBP
dUTPase
KH_2
Sec8_N
Motif
Other DBs
NCBI-ProteinID:
QDV24121
UniProt:
A0A518G6A3
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Position
complement(3105084..3106691)
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AA seq
535 aa
AA seq
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MPLNEIAPSIGGLLLAESDGLGMSSVLPVLIGIIVGAGGLLLLNILRGRDLKAQAQAILE
KAKSDGANVVREAELASKERTLQTKQQQEQEANQLREQVRKREAALDRREETLQQTADDF
RKQEKMVEANQRRLSEKMQDATNRSEQLKKVLADQTQQLQQISGLNRADAEDRLMKLLDR
ELEQEVGNKILKHERRVTEIAEQKAQEIILTAMQRYAASHTADSTTSTVDIPNDEMKGRI
IGREGRNIRAFEKATGVDVIIDDTPGVVIVSGFDPVRREVARQALDKLIADGRIHPSRIE
EIVAETEKELDRFIRRKGQEAAEEVNIGGLHEKIIYMLGRLHFRTSFSQNVLRHSVEVAF
LSGLMAEMTGLNPDVARRAGLLHDIGKAADHELEGGHPKIGADLLKRHGENEYVVHAALG
HHDQLTSDYPYTLLVATSDACSASRPGARRESLERYIKRMEELESIAKGFGGVEQAFAIQ
AGRELRVIVSARETDDAKAAKVCRDIAKAFEQQLTYPGEIKVTVVRESRFIEVAR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtgccattgaacgaaattgcaccatcgatcggtgggctgctcctggcagagtccgacggg
ctaggtatgtctagcgttctcccggttctgattggaattatcgtaggcgccggcggccta
ctgctactcaatattctccgcggacgcgatctcaaagcgcaggcccaagctattttggaa
aaagccaagagcgatggcgccaatgtggttcgagaagcggaattagcttccaaggaacga
acgctgcagaccaaacagcagcaagaacaggaagctaaccaattgcgtgaacaagtccgc
aagcgggaagcggccctggaccggcgcgaggaaacactgcagcaaacggccgatgacttc
cgcaagcaggaaaagatggttgaggccaatcaacgacgcttgtctgagaagatgcaggat
gcgaccaaccgcagtgagcagttgaagaaggtccttgccgaccagacccagcaactgcag
cagatcagcggattgaatcgcgccgacgcagaagaccgattaatgaagctgctcgatcgg
gagcttgagcaagaggtcggcaacaaaattctcaaacacgaacgtcgcgttacggagatc
gcagagcagaaagctcaagagatcatcctaactgccatgcaacgctatgcggcctcgcat
actgccgacagtacgaccagcaccgtagatatccccaacgatgaaatgaaggggagaatc
attgggagggagggacgcaatattcgcgcgttcgagaaggcgaccggcgtggacgtgatt
attgacgatactcccggagtcgtcatcgtcagcggatttgatccggtccgtcgcgaggta
gcccgacaagcgctcgacaaattgattgcggatgggcgcattcacccgtcgcggatcgag
gagatcgtggccgagaccgagaaggaactggaccggttcatccgtcgcaagggacaggaa
gcagctgaggaagtcaatatcggcgggctgcatgaaaagatcatttacatgctcggacga
ctccacttccgtaccagcttcagtcagaatgtcctacggcatagcgtagaagtcgccttt
ctatcaggcctgatggccgagatgaccggactcaacccagatgtcgcccggcgcgccggc
ttgctgcacgacattggcaaagcggcggaccatgagttggagggagggcaccccaagatt
ggagccgacttgctcaaacggcacggtgagaacgagtatgtcgtgcacgcagccctggga
caccacgaccaattgaccagcgactatccctacacgctcctcgtcgccacgtcggatgcc
tgcagcgcctcccgaccaggcgctcggcgtgaatcgctggaacgttacatcaaacgcatg
gaagagctggaatccattgccaaaggcttcggcggagtggagcaagcctttgccatccag
gcaggccgagaattgcgcgtgattgtgagcgcccgagaaaccgacgatgcgaaagcagcc
aaagtctgccgcgacatcgccaaagcctttgaacaacaattgacctatcccggcgagatc
aaagtgacggtcgtgcgagaatcacgattcattgaggttgccaggtga
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