Aureliella helgolandensis: Q31a_30550
Help
Entry
Q31a_30550 CDS
T06948
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ahel
Aureliella helgolandensis
Pathway
ahel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q31a_30550 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahel03019
]
Q31a_30550 (cshA)
03009 Ribosome biogenesis [BR:
ahel03009
]
Q31a_30550 (cshA)
Enzymes [BR:
ahel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Q31a_30550 (cshA)
Messenger RNA biogenesis [BR:
ahel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q31a_30550 (cshA)
Ribosome biogenesis [BR:
ahel03009
]
Prokaryotic type
rRNA helicases
Q31a_30550 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
QDV24734
UniProt:
A0A518G823
LinkDB
All DBs
Position
complement(3922495..3923847)
Genome browser
AA seq
450 aa
AA seq
DB search
MQSESKSNQAEPRAPSEASSFKELDLSPVMMRALERLGYETPSPIQASVIPPALDGHDIL
GQARTGTGKTAAFSIPILEMLDPLSECRNPQALILVPTRELAEQVFQEIERLAQGCKTAI
TVLAGGKHMRRQMAQLEEGTQIVVGTPGRVYDHIQRRTFKTQDLWCVVLDEADRMLDIGF
RPAIEQILRACPKDRQTMLLSATLADDIQRLTKRYLVEPVHINCSSKQVSVESIEQRYLS
IKQKDKFPLLVKLLCREEPEQAIIFCRTKRGTDRLHLSLQKELAKYPNLAGVRVDCIHGD
MNQRDRDRVFSDLRNGKVRILVATDVVGRGIDVSTVSHIINYDIPLDCDDYVHRVGRTGR
MGREGIAFTFVTADEGSQLTSIELNINLLLMRDELSEGGATIPTAYDTMRAEEALAKETS
ANEPEQPRKKRLFPMKRKANPRLAKVGAKR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgaaagtaaatccaaccaagcggagccacgggctccgtccgaggccagttct
tttaaggaattggacctctcaccagtaatgatgcgagcactcgagcgacttgggtatgag
accccctctcccatccaagcctcggtcatcccccctgccctggatgggcacgatattctg
ggacaagctcgcacaggaaccgggaaaacggcagcgttttccattcccatcttagagatg
ctcgacccgttgagtgagtgtcgcaatccgcaagcgttgatcttggtaccgacccgcgaa
ttggcggagcaggtgtttcaagaaattgagcggctggcccaaggctgcaaaacggcaatc
accgtcctagctggcggcaagcacatgcggcgtcaaatggcgcaactggaagagggaact
caaatcgtcgtcggcacccccggccgcgtctacgaccatatccagcggcgaaccttcaaa
acgcaagatctgtggtgcgtcgtactcgacgaagcggatcgaatgcttgatatcggcttc
cgacctgccatcgagcagattttgcgagcctgccccaaagatcgtcaaacgatgctcctg
agcgctacgctcgcagacgatattcaacgtctcaccaagcgttacctcgtcgaaccagtg
catatcaattgctcaagcaagcaggtctccgtcgaatcgattgaacagcgctatctgagt
atcaagcagaaggacaaattcccgctgctcgttaaattgctttgtcgcgaggagcccgag
caggccattatcttctgccggaccaaacgcgggacagaccgtttgcacctctccttgcag
aaagagctggccaaatatcccaatttggcaggcgtgcgggtcgattgcattcacggtgat
atgaaccagcgtgatcgcgatcgcgtgtttagcgacctgcgcaatggcaaagtgcgaatt
ttggtcgcaaccgacgtggttgggcgtgggatcgacgtttccaccgtctcccatatcatc
aactacgacataccgctcgattgcgacgattacgtgcatcgcgtgggtcgcaccggccgg
atgggccgcgaaggcatcgccttcacctttgtgaccgcagacgaggggagccaactcacc
tcgattgagttgaatatcaatctgctgctgatgcgggacgaacttagtgaagggggcgcc
accatccccacggcctacgacaccatgcgtgccgaggaggcattggccaaagagacatcc
gccaatgagccagagcagccgcgcaagaagcgtctcttcccaatgaaacgcaaagccaac
ccgcgactcgctaaggtgggtgcaaagcgctaa
DBGET
integrated database retrieval system
