Aureliella helgolandensis: Q31a_39980
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Entry
Q31a_39980 CDS
T06948
Symbol
omcB_2
Name
(GenBank) Large cysteine-rich periplasmic protein omcB precursor
Organism
ahel
Aureliella helgolandensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
SdrD_B
DUF7619
DUF7507
NPCBM_assoc
Integrin_A_Ig_3
SpaA
CarboxypepD_reg
TRAP_beta
bMG10
Chlam_OMP6
CarbopepD_reg_2
CARDB
DUF3103
Motif
Other DBs
NCBI-ProteinID:
QDV25671
UniProt:
A0A518GAP2
LinkDB
All DBs
Position
5257550..5261713
Genome browser
AA seq
1387 aa
AA seq
DB search
MEMRRLLAGDIATIGGNVFTDNTDDGFATGTNPPIEAATVYLYRDGGAGAGVGTFESSGG
TAAGDDILLETLATDVNGNYAFTGLAAGRYFVEQAPVAGKLQRTAETVKVVDITSTDAIG
VSTQTVDSFNDTLAALVVNSGTPTLSNSSASAEAITGERDLVVNHLSGGSTIAASLNSTL
LTVDTGVGTTGTVILSYDGADGDATTLSHLTGGDILDLTTGGGSAFHFLVGSEAGNTFDI
EVYSGAGNFSQISSESLPITVGAAATEDVILDFSSFTVGAGTGADFTNVTAIRIQINLAA
AADAQFDFSGIVAPFVATENFANLNPMAIGNQVFGDDNNNGTLDVGENGIAGVDLVLYED
TNSNGTLDIGAGDTVVGTTQTTDASGNYLFSDLLPGDYFVVVPATEFAANGDPLFNFLSS
STATLPNSVLADGTNVGAIFGASGVASGIITLVAGGEPTADGDDANTNSFVDFGFVPAVD
LAVTKVAVAEDDPTPSDGTVNATAGATVTYTITVTNNGPAASNNVVIVDDLPDLTPNALT
IESATATGGGTVTQTGNSAGELEIAYATLASGQTETITVVVRVPAAAAAATAQRNNVSVS
GTGNDTDSNNDTAFADIDIARLAVLTIAKSDTPDPVGVGSTLTYTILVTNTGSSTATNVE
ISDTLPAGLTFSSVTSTAGTASEASGVITVDIPSLDVAGTATVTVVTTVAAGFTGSTISN
SATAQADEAVQVTSTATTDVNPSVDLAITKADDVDPVDRGGQVVYTMVVTNNGPSDATNV
EVVDTLPAGVTFVSATGGTVTAPTGGSSDAIINVGSLASGDSTTVTVTVDVEQAAADTFT
NSAVVRSTETTAGFDANTANNTATETTSTQRTIDLAVTKSDSADPAIAGQALVYTIVVTN
NGPSDAIGVNLADNLPDGIQISSATSTAGTVTVPTSAQDTVAANNDDLTVNIGGLASGAS
ATITVNATVLPDARGTLSNVATVSTTDTTATETNTANNVATETTTLNSSVDLVVTKNDSV
DPALAGNALTYTIVVTNSGPSTATNVNLSDVLPSGVSFTSVATTQGSASQASGTVTAQLG
TLAPSASATITLIVGINGDTRGTLTNTASATATETESNTANNSATATTTVNGSVDLSVTK
TDNIDPAAAGSNVQYTIVVTNNGPSSATNVVMSDVLPAGMTFVSGTSTLGTVTNSGNTVT
GTIGTLASGASATITLTASINATATGTLTNTATVTGTETDTNTSNNSASQTTAVAVPKSI
SGVVYVDMNRNGINDAGDQMLPGVTVVLTGTDITSATINQSATTDANGAYIFSNLLPGTY
TVTQTQPAGYQDGAANAGTGSTTTPTTSANQITNITLGTTDAVAFDFGDLLSPLSKRRFL
ASSQVGD
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgcgccgcttgctggctggtgatatcgccaccatcggcggtaatgttttcacc
gacaacacagatgacggttttgcgaccggtaccaatcctcccatcgaagcggccacggta
tatctctatcgagatggtggagcgggggcaggcgtggggacctttgagagctcaggtggc
accgcagccggagacgacatactactcgaaaccctcgccaccgacgtcaatggtaactat
gccttcaccggcttggccgctggccgttacttcgtggaacaagcgcccgtcgctggcaag
ctccaacggactgcagaaaccgtcaaagtcgtagacatcacgtcgacggacgcgattggt
gtctccacgcagaccgtagattcgttcaatgacaccctggccgccttggtggtcaatagc
ggcacccccacactgtccaactctagcgccagcgcggaagcgattacgggtgaacgcgat
ttggtggtgaaccacctcagtggtggaagcacgattgcagcctccttaaattccacacta
ttgacggtggatacaggcgtgggaacgacaggcacggtcatcctttcctatgatggcgcc
gatggcgacgcgaccacgctatcgcacctcaccggcggcgatattttggacctaacaacc
gggggcggatcggccttccatttcctggtaggctccgaagcgggcaacacgtttgatatt
gaagtttactccggtgctggaaacttctcgcagatctcctctgagtcactccccatcacc
gtcggagccgctgctacggaggatgtcatcctcgacttcagctcgttcaccgtgggagct
ggtactggcgccgatttcaccaatgtcaccgccatacgcatccaaatcaatctagctgct
gcagcggacgcacaatttgacttctcaggaatcgtcgcccccttcgtcgctactgagaat
ttcgccaacctaaatccaatggcgatcggaaaccaagtcttcggtgacgacaacaataac
ggcaccctagatgtaggcgagaatggaatcgctggtgtcgacctcgttctgtacgaagac
accaacagcaacggaacgcttgatatcggcgcgggagataccgtcgtaggcacgacgcaa
accacagacgccagtgggaactatctcttcagcgatttgctgcctggtgactatttcgta
gtcgttccagcgacagagtttgctgccaatggcgatcctctattcaatttcctcagcagc
agcactgctacgttgcccaattccgtgttagccgatgggaccaatgtcggagcgatattt
ggagctagcggtgtagcctctgggatcatcacgttggttgctggcggtgagccaactgcc
gatggcgacgacgccaataccaacagttttgtcgactttggctttgtgcccgccgtcgac
cttgcagtcactaaagttgccgtggccgaggatgatcccacgccaagtgatggcacggta
aatgccaccgccggtgctaccgtcacttacacgattaccgtgacgaataacggaccagcg
gcatcgaataacgtcgtgattgttgatgacctaccggacctcaccccaaacgccctgacc
atcgagtccgccactgccacagggggcggcactgtgacgcaaacgggcaactcggctggt
gaactcgagatcgcctacgccacactcgcgtcaggccagaccgaaacgatcacggtcgtg
gtgcgcgtccctgcagccgcagctgctgcgaccgctcagcgcaacaacgtgagtgtatcg
ggaaccggcaatgataccgattcaaacaacgatacggccttcgcagacatcgatatcgct
cggctagcggtactgaccattgcgaagtcggatacacccgatccggtaggcgtgggcagc
accttgacctacacgattctagttaccaatacgggctcgtcgaccgcgacgaatgtcgag
atctctgacacacttcccgccggcttaaccttctcttccgttaccagcaccgccggtacg
gcttccgaagcgtctggcgttatcactgtcgacattccaagtttagatgttgcgggcaca
gctaccgtcaccgttgtgaccaccgttgcggctggcttcaccggttcgacgatttccaat
agtgccaccgctcaagcagacgaagcggttcaagttacttccacggcaacgacggacgtg
aatccgtccgtcgatctcgccatcaccaaagccgatgatgtcgacccggtcgaccggggg
gggcaggtcgtctacacgatggtagtgaccaacaacggccccagcgatgccacgaatgtc
gaagtcgtcgatacgcttccggcaggagtcaccttcgtttcggctaccggtggcaccgtt
accgcgccaactggtggtagctccgatgcaatcatcaacgtaggcagcctagcatcgggc
gactcaaccaccgtcacggtaactgtggatgttgagcaagctgcggcagacacattcacc
aatagtgccgtggtacgctcgaccgaaaccaccgctggatttgacgcgaacaccgcgaac
aatacagccacggaaacaacttcgacgcaacgcactatcgacctggcggtcaccaagagc
gactcagccgacccggccatcgccggccaagccttggtctatacgatcgtcgtgacgaac
aatggtccgtcggacgcgattggagtgaatttagccgacaacttgccggacggaattcaa
attagctccgcgacgtcgactgctggaaccgtaacggtcccgacctcggcacaggatacc
gtggcggcgaataacgacgatttaaccgtcaacattggtggtctagcctcgggtgcatcg
gcaacgatcacggtcaatgcaaccgtattgccagatgctcgcggcacactgagcaacgtg
gcaaccgtgtcgacgacagatacgacggcgacggagaccaacacggccaataacgtcgct
accgaaacgacaacgctcaactcctcagtggatctcgtagtcactaaaaacgattccgtt
gatccagccctggctggtaatgccctgacgtacaccattgttgtaaccaattctggtcct
tccacagcaacgaacgtgaatttgtcagacgttcttccgagtggcgttagctttacgagc
gtagcaaccacccaaggaagtgcgagtcaagcatcgggaaccgtgacggctcagttggga
actctcgcaccgtccgcttcggccaccatcacactcattgtgggcatcaacggagatact
cgaggcaccttaaccaatactgcatcagcgacggcgacagagacggagtcgaatacggcc
aacaactccgctacggccaccacaacggtcaacggcagtgttgatttgtcggttaccaag
acagacaatatcgaccccgcagcggctggaagcaacgtgcagtatacaatcgtcgttact
aacaacggcccatcctcggctacgaatgtggtgatgagcgatgtattgcctgctggcatg
acctttgtttcaggcacctcaacgctgggcaccgtaaccaactcggggaataccgttact
ggtaccatcggtactctggcctcaggagcctccgctacgattactctcaccgcttcaatc
aatgccacagcaactggaacgctgaccaataccgcgacggtcaccggcacggaaacggac
accaatacttcgaacaattcagcctcgcaaacaacggctgtcgcggtgcccaagagtatt
tcaggtgtggtctacgttgacatgaatcgcaacggaatcaacgatgctggcgaccagatg
ttgcccggtgtcaccgttgtgttgaccggcacggatattacgagcgcgacgatcaatcaa
tcggcgacgaccgacgcgaacggggcttacatctttagcaacctgttgcctggcacgtac
accgtcactcaaacccagccggctggataccaagatggtgccgccaatgccggtaccgga
tcgaccacgacgccgacgacctccgccaatcagatcaccaacatcactttgggaacgacc
gacgccgtcgccttcgatttcggagacctcctgtcgccactcagcaagcggcggttccta
gcttcctcacaagtcggtgattag
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