Aureliella helgolandensis: Q31a_45920
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Entry
Q31a_45920 CDS
T06948
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ahel
Aureliella helgolandensis
Brite
KEGG Orthology (KO) [BR:
ahel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahel03016
]
Q31a_45920 (rnd)
Enzymes [BR:
ahel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Q31a_45920 (rnd)
Transfer RNA biogenesis [BR:
ahel03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Q31a_45920 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QDV26220
UniProt:
A0A518GCD9
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All DBs
Position
complement(5937324..5938514)
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AA seq
396 aa
AA seq
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MNYTLINENDQLQSVVDAITAVDLVGIDTEFVAEDCYRPDLCLLQVSTREAVFIVDPKTI
DDISSVWQALLDPARTVIVHAGREEILFAHRATGMAVPKLFDVQVALGLMGGEYPASYGK
LLHRLLGENVPKGETRTDWRKRPLTRAQLEYAALDVLHLPLLYDALTEQLIAAGRLRWLE
DELARRQDNLIQTQEQEGWFKLSGIQSLHGKQLSIVRELWLWRDQRAQLKDMPARRVLRD
DLIVELAKRGSSDPAKIAHIRGLHHSGFQRFLPEIADCVTRGAKLPAPVAPWIGQSKRAR
PPALLQQFLTAAMSYLCRTNNIAPAIVGTSDDVGRLAGYWLDGARLTESDEEFPQLLRGW
RAELVGEPLYHIFTGKRALCVVDPKDEMPLGLCDAH
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtgaattatacgcttataaacgaaaatgatcagcttcagtcggtagtggatgcgataact
gcggtagatctagttggcatcgacaccgagtttgttgctgaggattgctaccgtcccgat
ctctgtctattgcaggtctcgacacgggaggccgtttttatcgtcgatccgaagacgatc
gatgatatctcctccgtgtggcaagccttgctcgacccggctcgcacggtgatcgtgcat
gctggacgcgaggaaattctgtttgcgcaccgcgccacaggcatggccgttcctaaacta
ttcgacgtgcaggttgcccttggattgatggggggagaatacccggcatcttacggcaag
ctcttgcaccgtctgctgggggaaaacgtccccaagggggagacccgcacagactggcgt
aagcgtcccctgacgcgagcacaactcgaatatgccgctttggatgtgctgcatttacca
cttctgtacgatgctttgacagaacagttgattgcggctgggaggctgcgatggttggaa
gatgaattggcgaggcgtcaggacaacttgatccagacgcaggagcaagaggggtggttc
aagctgtcagggatccaatcgctgcatggtaagcaattgtccattgtgcgtgaattgtgg
ttgtggcgcgaccagcgtgcgcaattgaaagacatgccagcgcggcgtgtgttgcgcgat
gatttgattgtggagctcgccaagcggggatcgtcggacccggccaagattgcgcacatt
cgcgggttgcatcacagtggatttcaacgctttcttcccgagatcgcagattgcgtcacg
cgtggtgccaaactaccggctccggttgcaccctggattggtcaaagcaagcgcgctcgg
cccccggctcttttgcagcaattcttgacggcagccatgtcctatctttgtcggaccaac
aatattgcacctgcgattgtgggaacgagcgacgacgtggggcgtttagcggggtactgg
ttagacggtgcccggctgaccgaatcggacgaggagtttccgcagttgctcagggggtgg
cgtgccgaattggtgggcgagcccttgtaccatattttcaccggtaagcgagctttgtgt
gtcgtggatcccaaggatgaaatgccactgggactctgtgacgctcattag
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