Aureliella helgolandensis: Q31a_53770
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Entry
Q31a_53770 CDS
T06948
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ahel
Aureliella helgolandensis
Pathway
ahel02020
Two-component system
ahel02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ahel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q31a_53770 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q31a_53770 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahel03021
]
Q31a_53770 (rpoN)
Transcription machinery [BR:
ahel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q31a_53770 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
HD_5
DUF745
Aim21
Motif
Other DBs
NCBI-ProteinID:
QDV26997
UniProt:
A0A518GEL4
LinkDB
All DBs
Position
complement(6899846..6901327)
Genome browser
AA seq
493 aa
AA seq
DB search
MRLSFGMETRQLQTQKLSPKMIQSMEILQLPVLALQERVEQEINENPMLEVQEDEDLSGN
TEEKEDPNRPTEDEKELVVKDNQSNTEDFERLDNMDSEMPQNFDDFRTSSNRTQEASDRQ
HDLMANAMERPESLNDYLMHQLAEMDIDSELEAIAERIISTLDARNGGYFKTSLRDLLQP
GHTEEDLGKAEEALEIVQSLDPPGIAARTLSECLLNQLTPDFDYYDILTVLIKDHLEDLA
ENRLPLIEKKMGVSIEQIQQARQEFHHLNPKPGAAFLETHVPIVSPDVVVEMDSSGQYTV
KLEDDRVPTLRISDYYRKRLADPNATAEEREFIRRKIESANWLIEAIQQRRNTVQKVAQS
IVEYQKKFLDDGPEFIEPLKMQQIADVVGVHVTTISRAVDDKWIQTPRGIFPLKRFFVHG
TRSEDGEDVAWETIRLKLTDLVDKEDKQKPYSDDDLVKELSKLGLTVARRTITKYRKKLG
IPSSRQRKDWIKS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcgactttcctttggaatggaaacccgtcaacttcaaacgcagaagttgtccccgaag
atgattcagtcgatggagattctgcagttgcccgtgctggcgctccaagagcgtgtggag
caggagatcaacgagaatcccatgctcgaagtccaagaggatgaggatctatccgggaac
accgaagagaaggaagatccaaatcgtcccaccgaagacgagaaggagttggtggtcaag
gacaatcaatcgaacacggaggattttgagcggctggacaatatggacagcgagatgccg
cagaatttcgatgattttcgcacctcctccaaccgtactcaggaagcctccgatcgccag
catgatttgatggccaatgccatggagcggcccgaatcgctcaatgactacctcatgcat
caattggcagagatggacattgattcggagcttgaggccattgccgaacggattatctcg
acgttggacgcccgcaacggcgggtattttaaaaccagcctgcgcgacttgctgcaacct
gggcacaccgaagaggatttggggaaggcggaagaggcgctggaaatcgtgcaatcctta
gatcccccggggatcgccgcacgcaccctcagcgagtgcttgttaaatcaactgacgcca
gattttgactactacgacatcctgactgtcttgattaaagaccacttggaagatctggcg
gagaatcgtctccccttgatcgaaaagaaaatgggagtgtcgatcgagcagattcaacag
gcgcgccaagagttccaccacctgaatcccaagccgggtgcagcctttctcgaaacgcac
gtccccattgtcagccccgacgtggttgttgaaatggattcttccgggcaatacaccgtc
aagctcgaagatgaccgtgtgcctactctgcggatcagcgattattaccgaaagcgcttg
gcggacccgaatgcgaccgccgaagagagagagtttattcgccgcaagattgagtctgcc
aattggttgatcgaagcgattcagcagcggcggaatacggtccaaaaggtagcgcagtcg
attgttgaataccaaaagaagtttctagacgacggtcccgagttcattgaaccgttgaaa
atgcagcaaattgcggatgtggtgggagttcacgtgactacgatcagtcgcgcggtggac
gataaatggattcaaacgccgcgtggtatcttcccactcaaacgctttttcgttcacggc
acacgcagtgaagacggcgaggatgtcgcctgggaaaccattcgcctgaaactgactgat
ctggtcgataaggaggataagcaaaagccgtacagcgacgacgacttggtaaaagaacta
tccaaattgggactgaccgtagcgcgtcgaaccattaccaagtatcgaaagaagctaggg
atcccgagcagtcggcagcgcaaagactggatcaaatcttag
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