Aureliella helgolandensis: Q31a_54330
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Entry
Q31a_54330 CDS
T06948
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ahel
Aureliella helgolandensis
Pathway
ahel03030
DNA replication
ahel03430
Mismatch repair
ahel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q31a_54330 (dnaE)
03430 Mismatch repair
Q31a_54330 (dnaE)
03440 Homologous recombination
Q31a_54330 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahel03032
]
Q31a_54330 (dnaE)
03400 DNA repair and recombination proteins [BR:
ahel03400
]
Q31a_54330 (dnaE)
Enzymes [BR:
ahel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q31a_54330 (dnaE)
DNA replication proteins [BR:
ahel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q31a_54330 (dnaE)
DNA repair and recombination proteins [BR:
ahel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q31a_54330 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
PHP_C
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QDV27052
UniProt:
A0A518GEM9
LinkDB
All DBs
Position
6959109..6962678
Genome browser
AA seq
1189 aa
AA seq
DB search
MSGNFVHLHCHSHYSLLDGASSVSKLIDRAKSHGMNALALTDHGNLHGALEFYKKSKAAG
INPIIGYEAYIAPGSRHSRGDASSSKSAAYHLTLLAQNRTGFKNLVKLASLASLEGFYFK
PRIDRECLEAHSEGIVCLSGCVSSEFSRAILNNKDADAAEKQAIEIAQWFHGVFDDRYYI
EIMNNHLEIQRLQLEGAVNIANKIGLPLVATSDAHYADKEDAEIQDVLLCINTGKFRTDS
ARMKMEGNQFYLRSPEEMYASFPGLESAVARSQEIANTVDIDLELGNRYFPKYDVPPQQT
ADEYLRELCTLGLKDRYAGNEEMLPGGELSQVVQDRLDRELGVIQKLGFANYFLIVWDFV
RYSREQKVPATARGSGVGALVCYALYMSHVCPIKYDLLFERFLDESRLEAPDIDIDFCKD
RRLDIVQYVRDKYGEDNVAQIGTFGTLAARAAIKDVGRALGIPLMRVNQITEMVPDELKI
TISKALEKNIELKAVYDSDQEIQELLDIAMKLEGNARNVGTHAAAVVIADEPLTEYVPLS
RVSGKTDIITQWSMNDVEDAGLLKMDFLGLRNLTILAKAVEIIQETTGEEIDILKFPLDD
KPTFALLQRGETKGVFQLESGGIRDLLQRMKPDKFSDIIATNALYRPGPLEGGMVDDFVA
VKHGRKEAIYLHQVLKDILEETNGVMVYQEQVMRILNRLGGIQLASAYTCIKAISKKKEA
LIAQNEAKFLEGATEKGLTAKQAQELWDMILKFAGYGFNKSHSTAYALVAYQTAYLKAHY
PVEFMAALLSGDIQGRNFKRKDSLVEHLEDCDRMGIKVVPPDVNTSFVDFAVRDGQIRFG
LSAIKGCGGASGETIVAIRERDGEFTSIFDFCERVDPSACNRATIETLIKAGAFDSLGVF
RSQLMAVVEKAIQAGASALADKKSGQMNFFEEMQEPDQAGPGISESLPDIPELPDKTKLF
MEKEVLGMFLSAHPMEEYKQMLSTFCSHTTLQLKDVKDRSEVIVGGMISSIKLANTRNPK
PGAPSKYANFDLEDLEGAARCICWPDGYENLGHLIVPESVVIMRATVDKRGGADDVNLLA
NEIIPIEEANERFTAGIRIHIDQNHHEEEEIPKLNEILRGYPGSMEVLIALKLLSGDMVQ
LKSKRHRVSITPELRGRLNDLLGTESHRLMVAPPKPRQNQGGGRRGRDN
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaattttgtacacctacattgccacagccactacagcttactggatggcgcc
agctctgttagcaaactcattgatcgggcaaagagccacgggatgaatgccttggcattg
accgaccatggcaatttgcatggcgcgcttgaattctacaagaaatcgaaagcggcaggg
atcaaccccattatcggctacgaggcctacattgcccccggcagccggcatagtcggggc
gacgcctccagctcgaaatctgccgcctatcacctcaccctgctcgcgcaaaaccgaacc
ggctttaagaatctggtcaaattagcgtcgctcgcttcgctggaaggcttttacttcaag
ccacgcatcgaccgcgagtgcttggaagcccacagcgagggaatcgtgtgcctcagtggt
tgtgtctccagcgaattttcgcgagccatcctcaacaataaagatgcggatgctgctgag
aagcaagccatcgaaatcgctcagtggtttcacggcgtattcgatgaccgttattacatc
gaaatcatgaacaaccatttggagattcaacgtctgcaattggagggcgccgtcaacatt
gccaacaagattggcttgccactggtggccaccagtgacgcccactatgccgataaggag
gatgcagagattcaagacgtcttgctgtgcattaacaccggcaagttccgcaccgattcg
gctcggatgaaaatggaggggaaccaattctacctacgctcgcccgaggagatgtacgcg
agtttcccaggcctggagagcgccgtggcgcgcagccaggagattgccaacacggtagac
atcgatttggaactcggcaatcgctacttccccaagtacgacgtcccaccgcagcagacg
gcagacgagtatcttcgcgagctctgcacgctggggctcaaggatcgctacgccggcaac
gaggagatgctgcccggtggcgaactctcgcaagtcgtccaagaccgcttggatcgcgaa
ctgggggtgattcaaaaactcggttttgccaattacttcttgatcgtgtgggactttgtg
cgctactcgcgcgagcagaaggtgcccgccacggcgagaggtagtggggtgggggccctg
gtctgctacgcgctctacatgagtcacgtctgtcccatcaaatacgacttgctcttcgaa
cgcttcctggatgaaagccgactggaagcgcccgatatcgacattgacttctgcaaggac
cgccgactcgacatcgtgcaatacgtgcgcgacaagtacggagaggacaatgttgctcaa
atcggaaccttcggcaccctggcagcccgcgcagcgatcaaggatgtgggtcgcgctctc
ggtatcccgttgatgcgggtgaaccaaatcaccgagatggtgccggacgagctaaaaatt
acgattagcaaggcactcgaaaagaacattgagctcaaagcagtctacgactcggaccaa
gaaatccaagaactgctcgatatcgcgatgaagctggagggcaacgcccgcaacgtgggg
acccacgccgcggccgtcgtgatcgcggatgaaccactcaccgaatacgtaccgctcagc
cgcgtatcgggcaagaccgacatcatcacccaatggtctatgaatgatgtcgaggacgcg
ggcctactgaagatggacttcttgggcctaagaaacctgacgatcctcgccaaagcggtg
gagatcatccaggaaacgaccggcgaagagattgacattctcaagtttccactggatgac
aaacctacctttgccttgctccaacgcggcgagaccaaaggggtcttccaactcgagagt
ggcggtatccgtgaccttttgcagcggatgaagcccgacaagtttagcgacattatcgcg
accaatgcgctctaccgacctgggccactcgaaggcggaatggtcgacgactttgtcgcc
gtgaaacacggacgcaaagaggcgatctacctgcatcaggtactgaaggacatcctggaa
gaaaccaacggagtgatggtttaccaggaacaggtgatgcggatcctcaaccgcctcgga
gggatccaactggccagtgcctacacctgtattaaggccattagtaagaagaaagaggcg
ttaattgcacaaaacgaagccaagttcctagagggagcgaccgaaaagggactcaccgct
aaacaagcccaagaactgtgggacatgatcctcaagtttgctggctacggcttcaacaag
agtcactccactgcatacgccctggtagcctaccaaaccgcatacttaaaagcgcattat
ccggttgagttcatggcggcactcctctccggagacatccagggacgcaatttcaaacgc
aaggattcgctcgtcgaacaccttgaagattgcgatcgcatggggattaaagtggtcccc
cccgacgttaacacctcctttgtcgattttgcggtccgcgatggccaaatccgctttggc
ctctcagccatcaagggatgcggcggcgcttcgggcgaaaccatcgtggccatccgggaa
agggatggtgaattcactagcatctttgacttctgcgagcgcgtcgatccgtcggcttgc
aatcgagccaccattgaaacgctgatcaaagccggcgccttcgattcgctgggggtgttc
cgctctcaactaatggcagtggttgagaaagccatccaagcaggtgcctccgcgttggcc
gacaaaaagagtggccagatgaactttttcgaagagatgcaagaacccgatcaagctggg
cctggaatcagtgaaagcctgcccgatatccctgaattgccagacaagaccaaactgttc
atggagaaggaagtgctgggaatgttcctctcggcgcaccccatggaagaatacaagcag
atgctcagtaccttctgctcacacaccaccctgcaattgaaggatgtgaaagaccggagc
gaagtcatcgttggcgggatgatctcctccatcaaactggccaatacgaggaatcccaag
cccggtgcccccagcaaatatgcgaactttgacctcgaagacctcgaaggcgcagcccgc
tgcatttgctggcccgacggctacgaaaacctcggccatctcatcgtgcccgagtcggta
gtcatcatgcgggcgacggtcgacaagcgagggggcgccgacgacgtcaacctgctggcc
aacgaaatcatccccattgaagaggccaatgaacgctttactgcagggattcgcatccac
atcgaccaaaatcatcacgaagaagaagagatccccaaactcaatgaaatcctgagagga
tacccaggctcgatggaagttctcatcgccttgaaactactctccggcgatatggtgcaa
ctcaagagcaaacgccaccgagtcagtatcacccccgaattaaggggaaggctgaacgat
ctcctcggtaccgaaagccaccgtctgatggttgctcctcccaaaccacgacagaatcaa
ggaggaggccgtcgcgggcgagataattaa
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